Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c18a' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6408300-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64


Version: 0.69
PID: 6076
Logging PID: 6077
Task:
{'appstream': False,
 'background': False,
 'build_id': 6408300,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '5f32b52dca88c4c106d896fadc78f74ce9814370',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/bout++',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'bout++',
 'package_version': '5.0.0-10',
 'project_dirname': 'zlib-ng-compat-mpb',
 'project_name': 'zlib-ng-compat-mpb',
 'project_owner': 'tuliom',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/tuliom/zlib-ng-compat-mpb/fedora-rawhide-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'tuliom/zlib-ng-compat-mpb--tuliom',
 'source_json': {},
 'source_type': None,
 'submitter': 'tuliom',
 'tags': [],
 'task_id': '6408300-fedora-rawhide-x86_64',
 'timeout': 115200,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/bout++ /var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++ --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/tuliom/zlib-ng-compat-mpb/bout++', '/var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++'...

Running: git checkout 5f32b52dca88c4c106d896fadc78f74ce9814370 --

cmd: ['git', 'checkout', '5f32b52dca88c4c106d896fadc78f74ce9814370', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++
rc: 0
stdout: 
stderr: Note: switching to '5f32b52dca88c4c106d896fadc78f74ce9814370'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 5f32b52 automatic import of bout++

Running: copr-distgit-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading BOUT++-v5.0.0.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o BOUT++-v5.0.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/tuliom/zlib-ng-compat-mpb/bout++/BOUT++-v5.0.0.tar.gz/md5/a7d6a9f9f2334e1956b9ba0e4430e0ae/BOUT++-v5.0.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 40.8M  100 40.8M    0     0  44.1M      0 --:--:-- --:--:-- --:--:-- 44.1M
INFO: Reading stdout from command: md5sum BOUT++-v5.0.0.tar.gz

Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++/bout++.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++ --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1695196992.761791 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.1.1 starting (python version = 3.11.3, NVR = mock-5.1.1-1.fc38)...
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++/bout++.spec)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.1.1
INFO: Mock Version: 5.1.1
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695196992.761791/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695196992.761791/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/425fb5454b3431c1e3e28f0e88345f5e4505c12213cf7af87f2b9b4dd92910dc/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/425fb5454b3431c1e3e28f0e88345f5e4505c12213cf7af87f2b9b4dd92910dc/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  25 MB/s | 7.1 MB     00:00    
fedora                                           22 MB/s |  73 MB     00:03    
Last metadata expiration check: 0:00:01 ago on Wed Sep 20 08:03:23 2023.
Package python3-dnf-4.16.2-4.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
 Package                      Arch       Version               Repository  Size
================================================================================
Installing:
 python3-dnf-plugins-core     noarch     4.4.2-1.fc39          fedora     293 k
Installing dependencies:
 dbus-libs                    x86_64     1:1.14.10-1.fc40      fedora     155 k
 python3-dateutil             noarch     1:2.8.2-10.fc39       fedora     355 k
 python3-dbus                 x86_64     1.3.2-4.fc39          fedora     157 k
 python3-distro               noarch     1.8.0-6.fc39          fedora      49 k
 python3-six                  noarch     1.16.0-12.fc39        fedora      41 k
 python3-systemd              x86_64     235-5.fc39            fedora     107 k

Transaction Summary
================================================================================
Install  7 Packages

Total download size: 1.1 M
Installed size: 3.5 M
Downloading Packages:
(1/7): dbus-libs-1.14.10-1.fc40.x86_64.rpm      165 kB/s | 155 kB     00:00    
(2/7): python3-distro-1.8.0-6.fc39.noarch.rpm   457 kB/s |  49 kB     00:00    
(3/7): python3-dbus-1.3.2-4.fc39.x86_64.rpm     119 kB/s | 157 kB     00:01    
(4/7): python3-six-1.16.0-12.fc39.noarch.rpm    175 kB/s |  41 kB     00:00    
(5/7): python3-dateutil-2.8.2-10.fc39.noarch.rp 171 kB/s | 355 kB     00:02    
(6/7): python3-dnf-plugins-core-4.4.2-1.fc39.no 269 kB/s | 293 kB     00:01    
(7/7): python3-systemd-235-5.fc39.x86_64.rpm    148 kB/s | 107 kB     00:00    
--------------------------------------------------------------------------------
Total                                           499 kB/s | 1.1 MB     00:02     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : python3-systemd-235-5.fc39.x86_64                      1/7 
  Installing       : python3-six-1.16.0-12.fc39.noarch                      2/7 
  Installing       : python3-dateutil-1:2.8.2-10.fc39.noarch                3/7 
  Installing       : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Installing       : dbus-libs-1:1.14.10-1.fc40.x86_64                      5/7 
  Installing       : python3-dbus-1.3.2-4.fc39.x86_64                       6/7 
  Installing       : python3-dnf-plugins-core-4.4.2-1.fc39.noarch           7/7 
  Running scriptlet: python3-dnf-plugins-core-4.4.2-1.fc39.noarch           7/7 
  Verifying        : dbus-libs-1:1.14.10-1.fc40.x86_64                      1/7 
  Verifying        : python3-dateutil-1:2.8.2-10.fc39.noarch                2/7 
  Verifying        : python3-dbus-1.3.2-4.fc39.x86_64                       3/7 
  Verifying        : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Verifying        : python3-dnf-plugins-core-4.4.2-1.fc39.noarch           5/7 
  Verifying        : python3-six-1.16.0-12.fc39.noarch                      6/7 
  Verifying        : python3-systemd-235-5.fc39.x86_64                      7/7 

Installed:
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  python3-dateutil-1:2.8.2-10.fc39.noarch                                       
  python3-dbus-1.3.2-4.fc39.x86_64                                              
  python3-distro-1.8.0-6.fc39.noarch                                            
  python3-dnf-plugins-core-4.4.2-1.fc39.noarch                                  
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-systemd-235-5.fc39.x86_64                                             

Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  42 MB/s | 7.1 MB     00:00    
fedora                                           26 MB/s |  73 MB     00:02    
Last metadata expiration check: 0:00:01 ago on Wed Sep 20 08:03:54 2023.
Dependencies resolved.
================================================================================
 Package                      Arch   Version                    Repo       Size
================================================================================
Installing group/module packages:
 bash                         x86_64 5.2.15-5.fc39              fedora    1.8 M
 bzip2                        x86_64 1.0.8-16.fc39              fedora     52 k
 coreutils                    x86_64 9.4-1.fc40                 fedora    1.1 M
 cpio                         x86_64 2.14-4.fc39                fedora    279 k
 diffutils                    x86_64 3.10-3.fc39                fedora    398 k
 fedora-release-common        noarch 40-0.7                     fedora     18 k
 findutils                    x86_64 1:4.9.0-6.fc40             fedora    492 k
 gawk                         x86_64 5.2.2-2.fc39               fedora    1.1 M
 glibc-minimal-langpack       x86_64 2.38.9000-9.fc40           fedora     74 k
 grep                         x86_64 3.11-5.fc40                fedora    298 k
 gzip                         x86_64 1.12-6.fc39                fedora    166 k
 info                         x86_64 7.0.3-3.fc39               fedora    182 k
 patch                        x86_64 2.7.6-22.fc39              fedora    125 k
 redhat-rpm-config            noarch 270-1.fc40                 copr_base  74 k
 rpm-build                    x86_64 4.18.99-1.fc40             copr_base  71 k
 sed                          x86_64 4.8-14.fc39                fedora    306 k
 shadow-utils                 x86_64 2:4.14.0-1.fc40            fedora    1.3 M
 tar                          x86_64 2:1.35-2.fc40              fedora    864 k
 unzip                        x86_64 6.0-62.fc39                fedora    184 k
 util-linux                   x86_64 2.39.2-1.fc40              copr_base 1.1 M
 which                        x86_64 2.21-40.fc39               fedora     42 k
 xz                           x86_64 5.4.4-1.fc39               fedora    556 k
Installing dependencies:
 alternatives                 x86_64 1.25-1.fc39                fedora     39 k
 ansible-srpm-macros          noarch 1-11.fc39                  fedora     21 k
 audit-libs                   x86_64 3.1.2-4.fc40               fedora    117 k
 authselect                   x86_64 1.4.2-3.fc39               fedora    144 k
 authselect-libs              x86_64 1.4.2-3.fc39               fedora    249 k
 basesystem                   noarch 11-18.fc39                 fedora    7.2 k
 binutils                     x86_64 2.41-5.fc40                fedora    6.3 M
 binutils-gold                x86_64 2.41-5.fc40                fedora    796 k
 bzip2-libs                   x86_64 1.0.8-16.fc39              fedora     41 k
 ca-certificates              noarch 2023.2.60_v7.0.306-3.fc40  fedora    837 k
 coreutils-common             x86_64 9.4-1.fc40                 fedora    2.1 M
 cracklib                     x86_64 2.9.11-2.fc40              copr_base  83 k
 crypto-policies              noarch 20230731-1.git5ed06e0.fc39 fedora     99 k
 curl                         x86_64 8.3.0-1.fc40               copr_base 354 k
 cyrus-sasl-lib               x86_64 2.1.28-11.fc40             copr_base 793 k
 debugedit                    x86_64 5.0-10.fc39                fedora     77 k
 dwz                          x86_64 0.15-3.fc39                fedora    134 k
 ed                           x86_64 1.19-4.fc39                fedora     79 k
 efi-srpm-macros              noarch 5-9.fc39                   fedora     22 k
 elfutils                     x86_64 0.189-6.fc40               copr_base 530 k
 elfutils-debuginfod-client   x86_64 0.189-6.fc40               copr_base  38 k
 elfutils-default-yama-scope  noarch 0.189-6.fc40               copr_base  14 k
 elfutils-libelf              x86_64 0.189-6.fc40               copr_base 195 k
 elfutils-libs                x86_64 0.189-6.fc40               copr_base 259 k
 fedora-gpg-keys              noarch 40-0.1                     fedora    130 k
 fedora-release               noarch 40-0.7                     fedora    8.0 k
 fedora-release-identity-basic
                              noarch 40-0.7                     fedora    8.8 k
 fedora-repos                 noarch 40-0.1                     fedora    9.4 k
 fedora-repos-rawhide         noarch 40-0.1                     fedora    9.0 k
 file                         x86_64 5.45-1.fc40                copr_base  50 k
 file-libs                    x86_64 5.45-1.fc40                copr_base 764 k
 filesystem                   x86_64 3.18-6.fc39                fedora    1.1 M
 fonts-srpm-macros            noarch 1:2.0.5-12.fc39            fedora     26 k
 forge-srpm-macros            noarch 0.1.0-1.fc40               fedora     18 k
 fpc-srpm-macros              noarch 1.3-8.fc39                 fedora    7.4 k
 gdb-minimal                  x86_64 13.2-9.fc40                fedora    4.2 M
 gdbm-libs                    x86_64 1:1.23-4.fc39              fedora     56 k
 ghc-srpm-macros              noarch 1.6.1-2.fc39               fedora    7.8 k
 glibc                        x86_64 2.38.9000-9.fc40           fedora    2.2 M
 glibc-common                 x86_64 2.38.9000-9.fc40           fedora    356 k
 glibc-gconv-extra            x86_64 2.38.9000-9.fc40           fedora    1.6 M
 gmp                          x86_64 1:6.2.1-5.fc39             fedora    313 k
 gnat-srpm-macros             noarch 6-3.fc39                   fedora    8.8 k
 go-srpm-macros               noarch 3.2.0-7.fc40               fedora     27 k
 jansson                      x86_64 2.13.1-7.fc39              fedora     44 k
 kernel-srpm-macros           noarch 1.0-20.fc39                fedora     10 k
 keyutils-libs                x86_64 1.6.1-7.fc39               fedora     31 k
 krb5-libs                    x86_64 1.21.2-1.fc40              fedora    765 k
 libacl                       x86_64 2.3.1-9.fc40               fedora     23 k
 libarchive                   x86_64 3.7.2-1.fc40               copr_base 408 k
 libattr                      x86_64 2.5.1-9.fc40               fedora     18 k
 libblkid                     x86_64 2.39.2-1.fc40              copr_base 116 k
 libbrotli                    x86_64 1.1.0-1.fc40               fedora    336 k
 libcap                       x86_64 2.48-7.fc39                fedora     68 k
 libcap-ng                    x86_64 0.8.3-8.fc40               fedora     32 k
 libcom_err                   x86_64 1.47.0-2.fc39              fedora     26 k
 libcurl                      x86_64 8.3.0-1.fc40               copr_base 344 k
 libdb                        x86_64 5.3.28-58.fc40             copr_base 759 k
 libeconf                     x86_64 0.5.2-1.fc40               fedora     30 k
 libevent                     x86_64 2.1.12-9.fc39              fedora    258 k
 libfdisk                     x86_64 2.39.2-1.fc40              copr_base 162 k
 libffi                       x86_64 3.4.4-4.fc39               fedora     40 k
 libgcc                       x86_64 13.2.1-1.fc40              copr_base 109 k
 libgomp                      x86_64 13.2.1-1.fc40              copr_base 319 k
 libidn2                      x86_64 2.3.4-3.fc39               fedora    117 k
 libmount                     x86_64 2.39.2-1.fc40              copr_base 155 k
 libnghttp2                   x86_64 1.56.0-1.fc40              copr_base  76 k
 libnsl2                      x86_64 2.0.0-6.fc39               fedora     30 k
 libpkgconf                   x86_64 1.9.5-2.fc39               fedora     38 k
 libpsl                       x86_64 0.21.2-4.fc39              fedora     63 k
 libpwquality                 x86_64 1.4.5-6.fc39               fedora    120 k
 libselinux                   x86_64 3.5-5.fc39                 fedora     87 k
 libsemanage                  x86_64 3.5-4.fc39                 fedora    120 k
 libsepol                     x86_64 3.5-2.fc39                 fedora    324 k
 libsigsegv                   x86_64 2.14-5.fc39                fedora     27 k
 libsmartcols                 x86_64 2.39.2-1.fc40              copr_base  67 k
 libssh                       x86_64 0.10.5-2.fc40              copr_base 211 k
 libssh-config                noarch 0.10.5-2.fc40              copr_base 9.7 k
 libstdc++                    x86_64 13.2.1-1.fc40              copr_base 860 k
 libtasn1                     x86_64 4.19.0-3.fc39              fedora     74 k
 libtirpc                     x86_64 1.3.3-1.rc2.fc39           fedora     94 k
 libunistring                 x86_64 1.1-5.fc40                 fedora    543 k
 libutempter                  x86_64 1.2.1-10.fc39              fedora     26 k
 libuuid                      x86_64 2.39.2-1.fc40              copr_base  28 k
 libverto                     x86_64 0.3.2-6.fc39               fedora     20 k
 libxcrypt                    x86_64 4.4.36-2.fc39              fedora    119 k
 libxml2                      x86_64 2.11.5-1.fc40              copr_base 697 k
 libzstd                      x86_64 1.5.5-4.fc40               copr_base 309 k
 lua-libs                     x86_64 5.4.6-3.fc39               fedora    133 k
 lua-srpm-macros              noarch 1-9.fc39                   fedora    8.6 k
 lz4-libs                     x86_64 1.9.4-4.fc39               fedora     67 k
 mpfr                         x86_64 4.2.0-3.fc39               fedora    344 k
 ncurses-base                 noarch 6.4-7.20230520.fc40        fedora     88 k
 ncurses-libs                 x86_64 6.4-7.20230520.fc40        fedora    337 k
 ocaml-srpm-macros            noarch 8-2.fc39                   fedora     14 k
 openblas-srpm-macros         noarch 2-14.fc39                  fedora    7.5 k
 openldap                     x86_64 2.6.6-1.fc39               fedora    255 k
 openssl-libs                 x86_64 1:3.1.1-4.fc40             copr_base 2.2 M
 p11-kit                      x86_64 0.25.0-2.fc39              fedora    486 k
 p11-kit-trust                x86_64 0.25.0-2.fc39              fedora    142 k
 package-notes-srpm-macros    noarch 0.5-9.fc39                 fedora     11 k
 pam                          x86_64 1.5.3-2.fc39               fedora    548 k
 pam-libs                     x86_64 1.5.3-2.fc39               fedora     58 k
 pcre2                        x86_64 10.42-1.fc39.2             fedora    233 k
 pcre2-syntax                 noarch 10.42-1.fc39.2             fedora    143 k
 perl-srpm-macros             noarch 1-51.fc39                  fedora    8.0 k
 pkgconf                      x86_64 1.9.5-2.fc39               fedora     42 k
 pkgconf-m4                   noarch 1.9.5-2.fc39               fedora     14 k
 pkgconf-pkg-config           x86_64 1.9.5-2.fc39               fedora    9.6 k
 popt                         x86_64 1.19-3.fc39                fedora     66 k
 publicsuffix-list-dafsa      noarch 20230812-1.fc40            fedora     57 k
 pyproject-srpm-macros        noarch 1.9.0-2.fc39               fedora     14 k
 python-srpm-macros           noarch 3.12-4.fc40                fedora     25 k
 qt5-srpm-macros              noarch 5.15.10-2.fc39             fedora    8.3 k
 qt6-srpm-macros              noarch 6.5.2-2.fc39               fedora    9.2 k
 readline                     x86_64 8.2-4.fc39                 fedora    213 k
 rpm                          x86_64 4.18.99-1.fc40             copr_base 508 k
 rpm-build-libs               x86_64 4.18.99-1.fc40             copr_base  96 k
 rpm-libs                     x86_64 4.18.99-1.fc40             copr_base 313 k
 rpm-sequoia                  x86_64 1.5.0-1.fc40               fedora    883 k
 rust-srpm-macros             noarch 24-5.fc40                  fedora     12 k
 setup                        noarch 2.14.4-1.fc39              fedora    154 k
 sqlite-libs                  x86_64 3.43.1-1.fc40              fedora    688 k
 systemd-libs                 x86_64 254.2-7.fc40               fedora    688 k
 tzdata                       noarch 2023c-3.fc40               fedora    718 k
 util-linux-core              x86_64 2.39.2-1.fc40              copr_base 479 k
 xxhash-libs                  x86_64 0.8.2-1.fc39               fedora     37 k
 xz-libs                      x86_64 5.4.4-1.fc39               fedora    108 k
 zip                          x86_64 3.0-39.fc40                fedora    266 k
 zlib-ng-compat               x86_64 2.1.3-4.fc40               copr_base  77 k
 zstd                         x86_64 1.5.5-4.fc40               copr_base 482 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  153 Packages

Total download size: 53 M
Installed size: 182 M
Downloading Packages:
(1/153): curl-8.3.0-1.fc40.x86_64.rpm           5.9 MB/s | 354 kB     00:00    
(2/153): cyrus-sasl-lib-2.1.28-11.fc40.x86_64.r 3.3 MB/s | 793 kB     00:00    
(3/153): elfutils-debuginfod-client-0.189-6.fc4  21 kB/s |  38 kB     00:01    
(4/153): elfutils-0.189-6.fc40.x86_64.rpm       260 kB/s | 530 kB     00:02    
(5/153): cracklib-2.9.11-2.fc40.x86_64.rpm       40 kB/s |  83 kB     00:02    
(6/153): elfutils-default-yama-scope-0.189-6.fc 330 kB/s |  14 kB     00:00    
(7/153): file-5.45-1.fc40.x86_64.rpm            5.3 MB/s |  50 kB     00:00    
(8/153): elfutils-libs-0.189-6.fc40.x86_64.rpm   11 MB/s | 259 kB     00:00    
(9/153): file-libs-5.45-1.fc40.x86_64.rpm        44 MB/s | 764 kB     00:00    
(10/153): libblkid-2.39.2-1.fc40.x86_64.rpm      10 MB/s | 116 kB     00:00    
(11/153): elfutils-libelf-0.189-6.fc40.x86_64.r 4.1 MB/s | 195 kB     00:00    
(12/153): libdb-5.3.28-58.fc40.x86_64.rpm        40 MB/s | 759 kB     00:00    
(13/153): libcurl-8.3.0-1.fc40.x86_64.rpm        16 MB/s | 344 kB     00:00    
(14/153): libfdisk-2.39.2-1.fc40.x86_64.rpm      14 MB/s | 162 kB     00:00    
(15/153): libgcc-13.2.1-1.fc40.x86_64.rpm       3.2 MB/s | 109 kB     00:00    
(16/153): libmount-2.39.2-1.fc40.x86_64.rpm      14 MB/s | 155 kB     00:00    
(17/153): libgomp-13.2.1-1.fc40.x86_64.rpm      7.2 MB/s | 319 kB     00:00    
(18/153): libsmartcols-2.39.2-1.fc40.x86_64.rpm 6.7 MB/s |  67 kB     00:00    
(19/153): libssh-0.10.5-2.fc40.x86_64.rpm        11 MB/s | 211 kB     00:00    
(20/153): libarchive-3.7.2-1.fc40.x86_64.rpm    2.7 MB/s | 408 kB     00:00    
(21/153): libssh-config-0.10.5-2.fc40.noarch.rp 449 kB/s | 9.7 kB     00:00    
(22/153): libuuid-2.39.2-1.fc40.x86_64.rpm      3.0 MB/s |  28 kB     00:00    
(23/153): libxml2-2.11.5-1.fc40.x86_64.rpm       43 MB/s | 697 kB     00:00    
(24/153): libnghttp2-1.56.0-1.fc40.x86_64.rpm   816 kB/s |  76 kB     00:00    
(25/153): libzstd-1.5.5-4.fc40.x86_64.rpm        24 MB/s | 309 kB     00:00    
(26/153): openssl-libs-3.1.1-4.fc40.x86_64.rpm   53 MB/s | 2.2 MB     00:00    
(27/153): redhat-rpm-config-270-1.fc40.noarch.r 2.0 MB/s |  74 kB     00:00    
(28/153): libstdc++-13.2.1-1.fc40.x86_64.rpm     11 MB/s | 860 kB     00:00    
(29/153): rpm-build-4.18.99-1.fc40.x86_64.rpm   1.6 MB/s |  71 kB     00:00    
(30/153): rpm-4.18.99-1.fc40.x86_64.rpm         9.7 MB/s | 508 kB     00:00    
(31/153): rpm-libs-4.18.99-1.fc40.x86_64.rpm    5.3 MB/s | 313 kB     00:00    
(32/153): util-linux-2.39.2-1.fc40.x86_64.rpm    21 MB/s | 1.1 MB     00:00    
(33/153): util-linux-core-2.39.2-1.fc40.x86_64.  25 MB/s | 479 kB     00:00    
(34/153): zlib-ng-compat-2.1.3-4.fc40.x86_64.rp 3.8 MB/s |  77 kB     00:00    
(35/153): rpm-build-libs-4.18.99-1.fc40.x86_64. 799 kB/s |  96 kB     00:00    
(36/153): zstd-1.5.5-4.fc40.x86_64.rpm           29 MB/s | 482 kB     00:00    
(37/153): ansible-srpm-macros-1-11.fc39.noarch. 153 kB/s |  21 kB     00:00    
(38/153): alternatives-1.25-1.fc39.x86_64.rpm   260 kB/s |  39 kB     00:00    
(39/153): audit-libs-3.1.2-4.fc40.x86_64.rpm    600 kB/s | 117 kB     00:00    
(40/153): authselect-1.4.2-3.fc39.x86_64.rpm    1.2 MB/s | 144 kB     00:00    
(41/153): basesystem-11-18.fc39.noarch.rpm      151 kB/s | 7.2 kB     00:00    
(42/153): authselect-libs-1.4.2-3.fc39.x86_64.r 1.9 MB/s | 249 kB     00:00    
(43/153): binutils-gold-2.41-5.fc40.x86_64.rpm  7.9 MB/s | 796 kB     00:00    
(44/153): bzip2-1.0.8-16.fc39.x86_64.rpm        1.0 MB/s |  52 kB     00:00    
(45/153): bash-5.2.15-5.fc39.x86_64.rpm          10 MB/s | 1.8 MB     00:00    
(46/153): bzip2-libs-1.0.8-16.fc39.x86_64.rpm   916 kB/s |  41 kB     00:00    
(47/153): ca-certificates-2023.2.60_v7.0.306-3.  10 MB/s | 837 kB     00:00    
(48/153): binutils-2.41-5.fc40.x86_64.rpm        20 MB/s | 6.3 MB     00:00    
(49/153): coreutils-9.4-1.fc40.x86_64.rpm       9.4 MB/s | 1.1 MB     00:00    
(50/153): cpio-2.14-4.fc39.x86_64.rpm           4.3 MB/s | 279 kB     00:00    
(51/153): coreutils-common-9.4-1.fc40.x86_64.rp  16 MB/s | 2.1 MB     00:00    
(52/153): crypto-policies-20230731-1.git5ed06e0 1.7 MB/s |  99 kB     00:00    
(53/153): diffutils-3.10-3.fc39.x86_64.rpm      6.4 MB/s | 398 kB     00:00    
(54/153): debugedit-5.0-10.fc39.x86_64.rpm      946 kB/s |  77 kB     00:00    
(55/153): dwz-0.15-3.fc39.x86_64.rpm            1.6 MB/s | 134 kB     00:00    
(56/153): ed-1.19-4.fc39.x86_64.rpm             1.3 MB/s |  79 kB     00:00    
(57/153): efi-srpm-macros-5-9.fc39.noarch.rpm   272 kB/s |  22 kB     00:00    
(58/153): fedora-release-40-0.7.noarch.rpm      209 kB/s | 8.0 kB     00:00    
(59/153): fedora-gpg-keys-40-0.1.noarch.rpm     1.5 MB/s | 130 kB     00:00    
(60/153): fedora-release-common-40-0.7.noarch.r 435 kB/s |  18 kB     00:00    
(61/153): fedora-release-identity-basic-40-0.7. 205 kB/s | 8.8 kB     00:00    
(62/153): fedora-repos-40-0.1.noarch.rpm        236 kB/s | 9.4 kB     00:00    
(63/153): fedora-repos-rawhide-40-0.1.noarch.rp 225 kB/s | 9.0 kB     00:00    
(64/153): findutils-4.9.0-6.fc40.x86_64.rpm     6.0 MB/s | 492 kB     00:00    
(65/153): filesystem-3.18-6.fc39.x86_64.rpm      12 MB/s | 1.1 MB     00:00    
(66/153): fonts-srpm-macros-2.0.5-12.fc39.noarc 307 kB/s |  26 kB     00:00    
(67/153): forge-srpm-macros-0.1.0-1.fc40.noarch 429 kB/s |  18 kB     00:00    
(68/153): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 157 kB/s | 7.4 kB     00:00    
(69/153): gawk-5.2.2-2.fc39.x86_64.rpm           17 MB/s | 1.1 MB     00:00    
(70/153): gdbm-libs-1.23-4.fc39.x86_64.rpm      1.2 MB/s |  56 kB     00:00    
(71/153): ghc-srpm-macros-1.6.1-2.fc39.noarch.r 112 kB/s | 7.8 kB     00:00    
(72/153): gdb-minimal-13.2-9.fc40.x86_64.rpm     30 MB/s | 4.2 MB     00:00    
(73/153): glibc-2.38.9000-9.fc40.x86_64.rpm      21 MB/s | 2.2 MB     00:00    
(74/153): glibc-common-2.38.9000-9.fc40.x86_64. 7.7 MB/s | 356 kB     00:00    
(75/153): glibc-gconv-extra-2.38.9000-9.fc40.x8  28 MB/s | 1.6 MB     00:00    
(76/153): glibc-minimal-langpack-2.38.9000-9.fc 1.8 MB/s |  74 kB     00:00    
(77/153): gmp-6.2.1-5.fc39.x86_64.rpm           6.1 MB/s | 313 kB     00:00    
(78/153): go-srpm-macros-3.2.0-7.fc40.noarch.rp 580 kB/s |  27 kB     00:00    
(79/153): gnat-srpm-macros-6-3.fc39.noarch.rpm  154 kB/s | 8.8 kB     00:00    
(80/153): grep-3.11-5.fc40.x86_64.rpm           5.9 MB/s | 298 kB     00:00    
(81/153): gzip-1.12-6.fc39.x86_64.rpm           4.9 MB/s | 166 kB     00:00    
(82/153): info-7.0.3-3.fc39.x86_64.rpm          4.0 MB/s | 182 kB     00:00    
(83/153): jansson-2.13.1-7.fc39.x86_64.rpm      1.1 MB/s |  44 kB     00:00    
(84/153): kernel-srpm-macros-1.0-20.fc39.noarch 234 kB/s |  10 kB     00:00    
(85/153): keyutils-libs-1.6.1-7.fc39.x86_64.rpm 803 kB/s |  31 kB     00:00    
(86/153): krb5-libs-1.21.2-1.fc40.x86_64.rpm     13 MB/s | 765 kB     00:00    
(87/153): libacl-2.3.1-9.fc40.x86_64.rpm        498 kB/s |  23 kB     00:00    
(88/153): libattr-2.5.1-9.fc40.x86_64.rpm       531 kB/s |  18 kB     00:00    
(89/153): libbrotli-1.1.0-1.fc40.x86_64.rpm     7.5 MB/s | 336 kB     00:00    
(90/153): libcap-2.48-7.fc39.x86_64.rpm         1.7 MB/s |  68 kB     00:00    
(91/153): libcap-ng-0.8.3-8.fc40.x86_64.rpm     666 kB/s |  32 kB     00:00    
(92/153): libcom_err-1.47.0-2.fc39.x86_64.rpm   611 kB/s |  26 kB     00:00    
(93/153): libeconf-0.5.2-1.fc40.x86_64.rpm      582 kB/s |  30 kB     00:00    
(94/153): libevent-2.1.12-9.fc39.x86_64.rpm     4.6 MB/s | 258 kB     00:00    
(95/153): libffi-3.4.4-4.fc39.x86_64.rpm        989 kB/s |  40 kB     00:00    
(96/153): libidn2-2.3.4-3.fc39.x86_64.rpm       2.6 MB/s | 117 kB     00:00    
(97/153): libnsl2-2.0.0-6.fc39.x86_64.rpm       408 kB/s |  30 kB     00:00    
(98/153): libpkgconf-1.9.5-2.fc39.x86_64.rpm    559 kB/s |  38 kB     00:00    
(99/153): libpsl-0.21.2-4.fc39.x86_64.rpm       995 kB/s |  63 kB     00:00    
(100/153): libpwquality-1.4.5-6.fc39.x86_64.rpm 2.9 MB/s | 120 kB     00:00    
(101/153): libselinux-3.5-5.fc39.x86_64.rpm     2.1 MB/s |  87 kB     00:00    
(102/153): libsemanage-3.5-4.fc39.x86_64.rpm    2.9 MB/s | 120 kB     00:00    
(103/153): libsepol-3.5-2.fc39.x86_64.rpm       6.6 MB/s | 324 kB     00:00    
(104/153): libsigsegv-2.14-5.fc39.x86_64.rpm    650 kB/s |  27 kB     00:00    
(105/153): libtasn1-4.19.0-3.fc39.x86_64.rpm    1.8 MB/s |  74 kB     00:00    
(106/153): libtirpc-1.3.3-1.rc2.fc39.x86_64.rpm 2.8 MB/s |  94 kB     00:00    
(107/153): libunistring-1.1-5.fc40.x86_64.rpm    11 MB/s | 543 kB     00:00    
(108/153): libutempter-1.2.1-10.fc39.x86_64.rpm 594 kB/s |  26 kB     00:00    
(109/153): libverto-0.3.2-6.fc39.x86_64.rpm     469 kB/s |  20 kB     00:00    
(110/153): libxcrypt-4.4.36-2.fc39.x86_64.rpm   2.9 MB/s | 119 kB     00:00    
(111/153): lua-libs-5.4.6-3.fc39.x86_64.rpm     3.7 MB/s | 133 kB     00:00    
(112/153): lua-srpm-macros-1-9.fc39.noarch.rpm  121 kB/s | 8.6 kB     00:00    
(113/153): lz4-libs-1.9.4-4.fc39.x86_64.rpm     987 kB/s |  67 kB     00:00    
(114/153): mpfr-4.2.0-3.fc39.x86_64.rpm         3.8 MB/s | 344 kB     00:00    
(115/153): ncurses-base-6.4-7.20230520.fc40.noa 2.0 MB/s |  88 kB     00:00    
(116/153): ncurses-libs-6.4-7.20230520.fc40.x86 7.4 MB/s | 337 kB     00:00    
(117/153): ocaml-srpm-macros-8-2.fc39.noarch.rp 331 kB/s |  14 kB     00:00    
(118/153): openblas-srpm-macros-2-14.fc39.noarc 185 kB/s | 7.5 kB     00:00    
(119/153): openldap-2.6.6-1.fc39.x86_64.rpm     5.8 MB/s | 255 kB     00:00    
(120/153): p11-kit-0.25.0-2.fc39.x86_64.rpm      10 MB/s | 486 kB     00:00    
(121/153): p11-kit-trust-0.25.0-2.fc39.x86_64.r 3.3 MB/s | 142 kB     00:00    
(122/153): package-notes-srpm-macros-0.5-9.fc39 235 kB/s |  11 kB     00:00    
(123/153): pam-libs-1.5.3-2.fc39.x86_64.rpm     1.5 MB/s |  58 kB     00:00    
(124/153): pam-1.5.3-2.fc39.x86_64.rpm          8.6 MB/s | 548 kB     00:00    
(125/153): patch-2.7.6-22.fc39.x86_64.rpm       2.8 MB/s | 125 kB     00:00    
(126/153): pcre2-10.42-1.fc39.2.x86_64.rpm      3.5 MB/s | 233 kB     00:00    
(127/153): pcre2-syntax-10.42-1.fc39.2.noarch.r 2.8 MB/s | 143 kB     00:00    
(128/153): perl-srpm-macros-1-51.fc39.noarch.rp 165 kB/s | 8.0 kB     00:00    
(129/153): pkgconf-1.9.5-2.fc39.x86_64.rpm      1.2 MB/s |  42 kB     00:00    
(130/153): pkgconf-m4-1.9.5-2.fc39.noarch.rpm   441 kB/s |  14 kB     00:00    
(131/153): pkgconf-pkg-config-1.9.5-2.fc39.x86_ 296 kB/s | 9.6 kB     00:00    
(132/153): popt-1.19-3.fc39.x86_64.rpm          1.5 MB/s |  66 kB     00:00    
(133/153): publicsuffix-list-dafsa-20230812-1.f 1.1 MB/s |  57 kB     00:00    
(134/153): pyproject-srpm-macros-1.9.0-2.fc39.n 268 kB/s |  14 kB     00:00    
(135/153): python-srpm-macros-3.12-4.fc40.noarc 631 kB/s |  25 kB     00:00    
(136/153): qt5-srpm-macros-5.15.10-2.fc39.noarc 164 kB/s | 8.3 kB     00:00    
(137/153): qt6-srpm-macros-6.5.2-2.fc39.noarch. 173 kB/s | 9.2 kB     00:00    
(138/153): readline-8.2-4.fc39.x86_64.rpm       3.8 MB/s | 213 kB     00:00    
(139/153): rpm-sequoia-1.5.0-1.fc40.x86_64.rpm   15 MB/s | 883 kB     00:00    
(140/153): rust-srpm-macros-24-5.fc40.noarch.rp 147 kB/s |  12 kB     00:00    
(141/153): setup-2.14.4-1.fc39.noarch.rpm       2.8 MB/s | 154 kB     00:00    
(142/153): sed-4.8-14.fc39.x86_64.rpm           3.5 MB/s | 306 kB     00:00    
(143/153): shadow-utils-4.14.0-1.fc40.x86_64.rp  18 MB/s | 1.3 MB     00:00    
(144/153): sqlite-libs-3.43.1-1.fc40.x86_64.rpm  11 MB/s | 688 kB     00:00    
(145/153): systemd-libs-254.2-7.fc40.x86_64.rpm 9.7 MB/s | 688 kB     00:00    
(146/153): tar-1.35-2.fc40.x86_64.rpm            16 MB/s | 864 kB     00:00    
(147/153): tzdata-2023c-3.fc40.noarch.rpm        12 MB/s | 718 kB     00:00    
(148/153): unzip-6.0-62.fc39.x86_64.rpm         3.2 MB/s | 184 kB     00:00    
(149/153): which-2.21-40.fc39.x86_64.rpm        793 kB/s |  42 kB     00:00    
(150/153): xxhash-libs-0.8.2-1.fc39.x86_64.rpm  747 kB/s |  37 kB     00:00    
(151/153): xz-5.4.4-1.fc39.x86_64.rpm            11 MB/s | 556 kB     00:00    
(152/153): xz-libs-5.4.4-1.fc39.x86_64.rpm      2.1 MB/s | 108 kB     00:00    
(153/153): zip-3.0-39.fc40.x86_64.rpm           4.2 MB/s | 266 kB     00:00    
--------------------------------------------------------------------------------
Total                                            11 MB/s |  53 MB     00:04     
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xA15B79CC:
 Userid     : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
 Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x18B8E74C:
 Userid     : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
 Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.18-6.fc39.x86_64                          1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-13.2.1-1.fc40.x86_64                          1/153 
  Running scriptlet: libgcc-13.2.1-1.fc40.x86_64                          1/153 
  Installing       : crypto-policies-20230731-1.git5ed06e0.fc39.noarc     2/153 
  Running scriptlet: crypto-policies-20230731-1.git5ed06e0.fc39.noarc     2/153 
  Installing       : tzdata-2023c-3.fc40.noarch                           3/153 
  Installing       : fedora-release-identity-basic-40-0.7.noarch          4/153 
  Installing       : fedora-repos-rawhide-40-0.1.noarch                   5/153 
  Installing       : fedora-gpg-keys-40-0.1.noarch                        6/153 
  Installing       : fedora-repos-40-0.1.noarch                           7/153 
  Installing       : fedora-release-common-40-0.7.noarch                  8/153 
  Installing       : fedora-release-40-0.7.noarch                         9/153 
  Installing       : setup-2.14.4-1.fc39.noarch                          10/153 
warning: /etc/hosts created as /etc/hosts.rpmnew

  Running scriptlet: setup-2.14.4-1.fc39.noarch                          10/153 
  Installing       : filesystem-3.18-6.fc39.x86_64                       11/153 
  Installing       : basesystem-11-18.fc39.noarch                        12/153 
  Installing       : rust-srpm-macros-24-5.fc40.noarch                   13/153 
  Installing       : qt6-srpm-macros-6.5.2-2.fc39.noarch                 14/153 
  Installing       : qt5-srpm-macros-5.15.10-2.fc39.noarch               15/153 
  Installing       : pyproject-srpm-macros-1.9.0-2.fc39.noarch           16/153 
  Installing       : publicsuffix-list-dafsa-20230812-1.fc40.noarch      17/153 
  Installing       : pkgconf-m4-1.9.5-2.fc39.noarch                      18/153 
  Installing       : perl-srpm-macros-1-51.fc39.noarch                   19/153 
  Installing       : pcre2-syntax-10.42-1.fc39.2.noarch                  20/153 
  Installing       : package-notes-srpm-macros-0.5-9.fc39.noarch         21/153 
  Installing       : openblas-srpm-macros-2-14.fc39.noarch               22/153 
  Installing       : ocaml-srpm-macros-8-2.fc39.noarch                   23/153 
  Installing       : ncurses-base-6.4-7.20230520.fc40.noarch             24/153 
  Installing       : glibc-gconv-extra-2.38.9000-9.fc40.x86_64           25/153 
  Running scriptlet: glibc-gconv-extra-2.38.9000-9.fc40.x86_64           25/153 
  Installing       : glibc-minimal-langpack-2.38.9000-9.fc40.x86_64      26/153 
  Installing       : glibc-common-2.38.9000-9.fc40.x86_64                27/153 
  Running scriptlet: glibc-2.38.9000-9.fc40.x86_64                       28/153 
  Installing       : glibc-2.38.9000-9.fc40.x86_64                       28/153 
  Running scriptlet: glibc-2.38.9000-9.fc40.x86_64                       28/153 
  Installing       : ncurses-libs-6.4-7.20230520.fc40.x86_64             29/153 
  Installing       : bash-5.2.15-5.fc39.x86_64                           30/153 
  Running scriptlet: bash-5.2.15-5.fc39.x86_64                           30/153 
  Installing       : zlib-ng-compat-2.1.3-4.fc40.x86_64                  31/153 
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  Verifying        : publicsuffix-list-dafsa-20230812-1.fc40.noarch     133/153 
  Verifying        : pyproject-srpm-macros-1.9.0-2.fc39.noarch          134/153 
  Verifying        : python-srpm-macros-3.12-4.fc40.noarch              135/153 
  Verifying        : qt5-srpm-macros-5.15.10-2.fc39.noarch              136/153 
  Verifying        : qt6-srpm-macros-6.5.2-2.fc39.noarch                137/153 
  Verifying        : readline-8.2-4.fc39.x86_64                         138/153 
  Verifying        : rpm-sequoia-1.5.0-1.fc40.x86_64                    139/153 
  Verifying        : rust-srpm-macros-24-5.fc40.noarch                  140/153 
  Verifying        : sed-4.8-14.fc39.x86_64                             141/153 
  Verifying        : setup-2.14.4-1.fc39.noarch                         142/153 
  Verifying        : shadow-utils-2:4.14.0-1.fc40.x86_64                143/153 
  Verifying        : sqlite-libs-3.43.1-1.fc40.x86_64                   144/153 
  Verifying        : systemd-libs-254.2-7.fc40.x86_64                   145/153 
  Verifying        : tar-2:1.35-2.fc40.x86_64                           146/153 
  Verifying        : tzdata-2023c-3.fc40.noarch                         147/153 
  Verifying        : unzip-6.0-62.fc39.x86_64                           148/153 
  Verifying        : which-2.21-40.fc39.x86_64                          149/153 
  Verifying        : xxhash-libs-0.8.2-1.fc39.x86_64                    150/153 
  Verifying        : xz-5.4.4-1.fc39.x86_64                             151/153 
  Verifying        : xz-libs-5.4.4-1.fc39.x86_64                        152/153 
  Verifying        : zip-3.0-39.fc40.x86_64                             153/153 

Installed:
  alternatives-1.25-1.fc39.x86_64                                               
  ansible-srpm-macros-1-11.fc39.noarch                                          
  audit-libs-3.1.2-4.fc40.x86_64                                                
  authselect-1.4.2-3.fc39.x86_64                                                
  authselect-libs-1.4.2-3.fc39.x86_64                                           
  basesystem-11-18.fc39.noarch                                                  
  bash-5.2.15-5.fc39.x86_64                                                     
  binutils-2.41-5.fc40.x86_64                                                   
  binutils-gold-2.41-5.fc40.x86_64                                              
  bzip2-1.0.8-16.fc39.x86_64                                                    
  bzip2-libs-1.0.8-16.fc39.x86_64                                               
  ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch                              
  coreutils-9.4-1.fc40.x86_64                                                   
  coreutils-common-9.4-1.fc40.x86_64                                            
  cpio-2.14-4.fc39.x86_64                                                       
  cracklib-2.9.11-2.fc40.x86_64                                                 
  crypto-policies-20230731-1.git5ed06e0.fc39.noarch                             
  curl-8.3.0-1.fc40.x86_64                                                      
  cyrus-sasl-lib-2.1.28-11.fc40.x86_64                                          
  debugedit-5.0-10.fc39.x86_64                                                  
  diffutils-3.10-3.fc39.x86_64                                                  
  dwz-0.15-3.fc39.x86_64                                                        
  ed-1.19-4.fc39.x86_64                                                         
  efi-srpm-macros-5-9.fc39.noarch                                               
  elfutils-0.189-6.fc40.x86_64                                                  
  elfutils-debuginfod-client-0.189-6.fc40.x86_64                                
  elfutils-default-yama-scope-0.189-6.fc40.noarch                               
  elfutils-libelf-0.189-6.fc40.x86_64                                           
  elfutils-libs-0.189-6.fc40.x86_64                                             
  fedora-gpg-keys-40-0.1.noarch                                                 
  fedora-release-40-0.7.noarch                                                  
  fedora-release-common-40-0.7.noarch                                           
  fedora-release-identity-basic-40-0.7.noarch                                   
  fedora-repos-40-0.1.noarch                                                    
  fedora-repos-rawhide-40-0.1.noarch                                            
  file-5.45-1.fc40.x86_64                                                       
  file-libs-5.45-1.fc40.x86_64                                                  
  filesystem-3.18-6.fc39.x86_64                                                 
  findutils-1:4.9.0-6.fc40.x86_64                                               
  fonts-srpm-macros-1:2.0.5-12.fc39.noarch                                      
  forge-srpm-macros-0.1.0-1.fc40.noarch                                         
  fpc-srpm-macros-1.3-8.fc39.noarch                                             
  gawk-5.2.2-2.fc39.x86_64                                                      
  gdb-minimal-13.2-9.fc40.x86_64                                                
  gdbm-libs-1:1.23-4.fc39.x86_64                                                
  ghc-srpm-macros-1.6.1-2.fc39.noarch                                           
  glibc-2.38.9000-9.fc40.x86_64                                                 
  glibc-common-2.38.9000-9.fc40.x86_64                                          
  glibc-gconv-extra-2.38.9000-9.fc40.x86_64                                     
  glibc-minimal-langpack-2.38.9000-9.fc40.x86_64                                
  gmp-1:6.2.1-5.fc39.x86_64                                                     
  gnat-srpm-macros-6-3.fc39.noarch                                              
  go-srpm-macros-3.2.0-7.fc40.noarch                                            
  grep-3.11-5.fc40.x86_64                                                       
  gzip-1.12-6.fc39.x86_64                                                       
  info-7.0.3-3.fc39.x86_64                                                      
  jansson-2.13.1-7.fc39.x86_64                                                  
  kernel-srpm-macros-1.0-20.fc39.noarch                                         
  keyutils-libs-1.6.1-7.fc39.x86_64                                             
  krb5-libs-1.21.2-1.fc40.x86_64                                                
  libacl-2.3.1-9.fc40.x86_64                                                    
  libarchive-3.7.2-1.fc40.x86_64                                                
  libattr-2.5.1-9.fc40.x86_64                                                   
  libblkid-2.39.2-1.fc40.x86_64                                                 
  libbrotli-1.1.0-1.fc40.x86_64                                                 
  libcap-2.48-7.fc39.x86_64                                                     
  libcap-ng-0.8.3-8.fc40.x86_64                                                 
  libcom_err-1.47.0-2.fc39.x86_64                                               
  libcurl-8.3.0-1.fc40.x86_64                                                   
  libdb-5.3.28-58.fc40.x86_64                                                   
  libeconf-0.5.2-1.fc40.x86_64                                                  
  libevent-2.1.12-9.fc39.x86_64                                                 
  libfdisk-2.39.2-1.fc40.x86_64                                                 
  libffi-3.4.4-4.fc39.x86_64                                                    
  libgcc-13.2.1-1.fc40.x86_64                                                   
  libgomp-13.2.1-1.fc40.x86_64                                                  
  libidn2-2.3.4-3.fc39.x86_64                                                   
  libmount-2.39.2-1.fc40.x86_64                                                 
  libnghttp2-1.56.0-1.fc40.x86_64                                               
  libnsl2-2.0.0-6.fc39.x86_64                                                   
  libpkgconf-1.9.5-2.fc39.x86_64                                                
  libpsl-0.21.2-4.fc39.x86_64                                                   
  libpwquality-1.4.5-6.fc39.x86_64                                              
  libselinux-3.5-5.fc39.x86_64                                                  
  libsemanage-3.5-4.fc39.x86_64                                                 
  libsepol-3.5-2.fc39.x86_64                                                    
  libsigsegv-2.14-5.fc39.x86_64                                                 
  libsmartcols-2.39.2-1.fc40.x86_64                                             
  libssh-0.10.5-2.fc40.x86_64                                                   
  libssh-config-0.10.5-2.fc40.noarch                                            
  libstdc++-13.2.1-1.fc40.x86_64                                                
  libtasn1-4.19.0-3.fc39.x86_64                                                 
  libtirpc-1.3.3-1.rc2.fc39.x86_64                                              
  libunistring-1.1-5.fc40.x86_64                                                
  libutempter-1.2.1-10.fc39.x86_64                                              
  libuuid-2.39.2-1.fc40.x86_64                                                  
  libverto-0.3.2-6.fc39.x86_64                                                  
  libxcrypt-4.4.36-2.fc39.x86_64                                                
  libxml2-2.11.5-1.fc40.x86_64                                                  
  libzstd-1.5.5-4.fc40.x86_64                                                   
  lua-libs-5.4.6-3.fc39.x86_64                                                  
  lua-srpm-macros-1-9.fc39.noarch                                               
  lz4-libs-1.9.4-4.fc39.x86_64                                                  
  mpfr-4.2.0-3.fc39.x86_64                                                      
  ncurses-base-6.4-7.20230520.fc40.noarch                                       
  ncurses-libs-6.4-7.20230520.fc40.x86_64                                       
  ocaml-srpm-macros-8-2.fc39.noarch                                             
  openblas-srpm-macros-2-14.fc39.noarch                                         
  openldap-2.6.6-1.fc39.x86_64                                                  
  openssl-libs-1:3.1.1-4.fc40.x86_64                                            
  p11-kit-0.25.0-2.fc39.x86_64                                                  
  p11-kit-trust-0.25.0-2.fc39.x86_64                                            
  package-notes-srpm-macros-0.5-9.fc39.noarch                                   
  pam-1.5.3-2.fc39.x86_64                                                       
  pam-libs-1.5.3-2.fc39.x86_64                                                  
  patch-2.7.6-22.fc39.x86_64                                                    
  pcre2-10.42-1.fc39.2.x86_64                                                   
  pcre2-syntax-10.42-1.fc39.2.noarch                                            
  perl-srpm-macros-1-51.fc39.noarch                                             
  pkgconf-1.9.5-2.fc39.x86_64                                                   
  pkgconf-m4-1.9.5-2.fc39.noarch                                                
  pkgconf-pkg-config-1.9.5-2.fc39.x86_64                                        
  popt-1.19-3.fc39.x86_64                                                       
  publicsuffix-list-dafsa-20230812-1.fc40.noarch                                
  pyproject-srpm-macros-1.9.0-2.fc39.noarch                                     
  python-srpm-macros-3.12-4.fc40.noarch                                         
  qt5-srpm-macros-5.15.10-2.fc39.noarch                                         
  qt6-srpm-macros-6.5.2-2.fc39.noarch                                           
  readline-8.2-4.fc39.x86_64                                                    
  redhat-rpm-config-270-1.fc40.noarch                                           
  rpm-4.18.99-1.fc40.x86_64                                                     
  rpm-build-4.18.99-1.fc40.x86_64                                               
  rpm-build-libs-4.18.99-1.fc40.x86_64                                          
  rpm-libs-4.18.99-1.fc40.x86_64                                                
  rpm-sequoia-1.5.0-1.fc40.x86_64                                               
  rust-srpm-macros-24-5.fc40.noarch                                             
  sed-4.8-14.fc39.x86_64                                                        
  setup-2.14.4-1.fc39.noarch                                                    
  shadow-utils-2:4.14.0-1.fc40.x86_64                                           
  sqlite-libs-3.43.1-1.fc40.x86_64                                              
  systemd-libs-254.2-7.fc40.x86_64                                              
  tar-2:1.35-2.fc40.x86_64                                                      
  tzdata-2023c-3.fc40.noarch                                                    
  unzip-6.0-62.fc39.x86_64                                                      
  util-linux-2.39.2-1.fc40.x86_64                                               
  util-linux-core-2.39.2-1.fc40.x86_64                                          
  which-2.21-40.fc39.x86_64                                                     
  xxhash-libs-0.8.2-1.fc39.x86_64                                               
  xz-5.4.4-1.fc39.x86_64                                                        
  xz-libs-5.4.4-1.fc39.x86_64                                                   
  zip-3.0-39.fc40.x86_64                                                        
  zlib-ng-compat-2.1.3-4.fc40.x86_64                                            
  zstd-1.5.5-4.fc40.x86_64                                                      

Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.x86_64
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-4.fc40.x86_64
authselect-1.4.2-3.fc39.x86_64
authselect-libs-1.4.2-3.fc39.x86_64
basesystem-11-18.fc39.noarch
bash-5.2.15-5.fc39.x86_64
binutils-2.41-5.fc40.x86_64
binutils-gold-2.41-5.fc40.x86_64
bzip2-1.0.8-16.fc39.x86_64
bzip2-libs-1.0.8-16.fc39.x86_64
ca-certificates-2023.2.60_v7.0.306-3.fc40.noarch
coreutils-9.4-1.fc40.x86_64
coreutils-common-9.4-1.fc40.x86_64
cpio-2.14-4.fc39.x86_64
cracklib-2.9.11-2.fc40.x86_64
crypto-policies-20230731-1.git5ed06e0.fc39.noarch
curl-8.3.0-1.fc40.x86_64
cyrus-sasl-lib-2.1.28-11.fc40.x86_64
debugedit-5.0-10.fc39.x86_64
diffutils-3.10-3.fc39.x86_64
dwz-0.15-3.fc39.x86_64
ed-1.19-4.fc39.x86_64
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.189-6.fc40.x86_64
elfutils-debuginfod-client-0.189-6.fc40.x86_64
elfutils-default-yama-scope-0.189-6.fc40.noarch
elfutils-libelf-0.189-6.fc40.x86_64
elfutils-libs-0.189-6.fc40.x86_64
fedora-gpg-keys-40-0.1.noarch
fedora-release-40-0.7.noarch
fedora-release-common-40-0.7.noarch
fedora-release-identity-basic-40-0.7.noarch
fedora-repos-40-0.1.noarch
fedora-repos-rawhide-40-0.1.noarch
file-5.45-1.fc40.x86_64
file-libs-5.45-1.fc40.x86_64
filesystem-3.18-6.fc39.x86_64
findutils-4.9.0-6.fc40.x86_64
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.x86_64
gdb-minimal-13.2-9.fc40.x86_64
gdbm-libs-1.23-4.fc39.x86_64
ghc-srpm-macros-1.6.1-2.fc39.noarch
glibc-2.38.9000-9.fc40.x86_64
glibc-common-2.38.9000-9.fc40.x86_64
glibc-gconv-extra-2.38.9000-9.fc40.x86_64
glibc-minimal-langpack-2.38.9000-9.fc40.x86_64
gmp-6.2.1-5.fc39.x86_64
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.2.0-7.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.x86_64
gzip-1.12-6.fc39.x86_64
info-7.0.3-3.fc39.x86_64
jansson-2.13.1-7.fc39.x86_64
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.x86_64
krb5-libs-1.21.2-1.fc40.x86_64
libacl-2.3.1-9.fc40.x86_64
libarchive-3.7.2-1.fc40.x86_64
libattr-2.5.1-9.fc40.x86_64
libblkid-2.39.2-1.fc40.x86_64
libbrotli-1.1.0-1.fc40.x86_64
libcap-2.48-7.fc39.x86_64
libcap-ng-0.8.3-8.fc40.x86_64
libcom_err-1.47.0-2.fc39.x86_64
libcurl-8.3.0-1.fc40.x86_64
libdb-5.3.28-58.fc40.x86_64
libeconf-0.5.2-1.fc40.x86_64
libevent-2.1.12-9.fc39.x86_64
libfdisk-2.39.2-1.fc40.x86_64
libffi-3.4.4-4.fc39.x86_64
libgcc-13.2.1-1.fc40.x86_64
libgomp-13.2.1-1.fc40.x86_64
libidn2-2.3.4-3.fc39.x86_64
libmount-2.39.2-1.fc40.x86_64
libnghttp2-1.56.0-1.fc40.x86_64
libnsl2-2.0.0-6.fc39.x86_64
libpkgconf-1.9.5-2.fc39.x86_64
libpsl-0.21.2-4.fc39.x86_64
libpwquality-1.4.5-6.fc39.x86_64
libselinux-3.5-5.fc39.x86_64
libsemanage-3.5-4.fc39.x86_64
libsepol-3.5-2.fc39.x86_64
libsigsegv-2.14-5.fc39.x86_64
libsmartcols-2.39.2-1.fc40.x86_64
libssh-0.10.5-2.fc40.x86_64
libssh-config-0.10.5-2.fc40.noarch
libstdc++-13.2.1-1.fc40.x86_64
libtasn1-4.19.0-3.fc39.x86_64
libtirpc-1.3.3-1.rc2.fc39.x86_64
libunistring-1.1-5.fc40.x86_64
libutempter-1.2.1-10.fc39.x86_64
libuuid-2.39.2-1.fc40.x86_64
libverto-0.3.2-6.fc39.x86_64
libxcrypt-4.4.36-2.fc39.x86_64
libxml2-2.11.5-1.fc40.x86_64
libzstd-1.5.5-4.fc40.x86_64
lua-libs-5.4.6-3.fc39.x86_64
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.x86_64
mpfr-4.2.0-3.fc39.x86_64
ncurses-base-6.4-7.20230520.fc40.noarch
ncurses-libs-6.4-7.20230520.fc40.x86_64
ocaml-srpm-macros-8-2.fc39.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.x86_64
openssl-libs-3.1.1-4.fc40.x86_64
p11-kit-0.25.0-2.fc39.x86_64
p11-kit-trust-0.25.0-2.fc39.x86_64
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-2.fc39.x86_64
pam-libs-1.5.3-2.fc39.x86_64
patch-2.7.6-22.fc39.x86_64
pcre2-10.42-1.fc39.2.x86_64
pcre2-syntax-10.42-1.fc39.2.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.x86_64
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.x86_64
popt-1.19-3.fc39.x86_64
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.9.0-2.fc39.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.10-2.fc39.noarch
qt6-srpm-macros-6.5.2-2.fc39.noarch
readline-8.2-4.fc39.x86_64
redhat-rpm-config-270-1.fc40.noarch
rpm-4.18.99-1.fc40.x86_64
rpm-build-4.18.99-1.fc40.x86_64
rpm-build-libs-4.18.99-1.fc40.x86_64
rpm-libs-4.18.99-1.fc40.x86_64
rpm-sequoia-1.5.0-1.fc40.x86_64
rust-srpm-macros-24-5.fc40.noarch
sed-4.8-14.fc39.x86_64
setup-2.14.4-1.fc39.noarch
shadow-utils-4.14.0-1.fc40.x86_64
sqlite-libs-3.43.1-1.fc40.x86_64
systemd-libs-254.2-7.fc40.x86_64
tar-1.35-2.fc40.x86_64
tzdata-2023c-3.fc40.noarch
unzip-6.0-62.fc39.x86_64
util-linux-2.39.2-1.fc40.x86_64
util-linux-core-2.39.2-1.fc40.x86_64
which-2.21-40.fc39.x86_64
xxhash-libs-0.8.2-1.fc39.x86_64
xz-5.4.4-1.fc39.x86_64
xz-libs-5.4.4-1.fc39.x86_64
zip-3.0-39.fc40.x86_64
zlib-ng-compat-2.1.3-4.fc40.x86_64
zstd-1.5.5-4.fc40.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1691971200
Wrote: /builddir/build/SRPMS/bout++-5.0.0-10.fc40.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-r6i36e_3/bout++/bout++.spec) Config(child) 1 minutes 18 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/bout++-5.0.0-10.fc40.src.rpm)  Config(fedora-rawhide-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695196992.761791/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1695196992.761791/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.18.99-1.fc40.x86_64
  rpm-sequoia-1.5.0-1.fc40.x86_64
  python3-dnf-4.16.2-4.fc40.noarch
  python3-dnf-plugins-core-4.4.2-1.fc39.noarch
  yum-4.16.2-4.fc40.noarch
Start: build phase for bout++-5.0.0-10.fc40.src.rpm
Start: build setup for bout++-5.0.0-10.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1691971200
Wrote: /builddir/build/SRPMS/bout++-5.0.0-10.fc40.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  30 kB/s | 1.5 kB     00:00    
fedora                                          443 kB/s |  20 kB     00:00    
Dependencies resolved.
===============================================================================================
 Package                                 Arch    Version                       Repo        Size
===============================================================================================
Installing:
 chrpath                                 x86_64  0.16-21.fc39                  fedora      30 k
 cmake                                   x86_64  3.27.4-8.fc40                 fedora     8.0 M
 doxygen                                 x86_64  2:1.9.8-1.fc40                copr_base  5.3 M
 environment-modules                     x86_64  5.3.1-2.fc39                  fedora     703 k
 fftw-devel                              x86_64  3.3.10-7.fc39                 fedora     134 k
 flexiblas-devel                         x86_64  3.3.1-5.fc39                  fedora     117 k
 fmt-devel                               x86_64  10.0.0-3.fc39                 fedora     128 k
 gcc-c++                                 x86_64  13.2.1-1.fc40                 copr_base   13 M
 gettext-devel                           x86_64  0.22-2.fc39                   fedora     236 k
 hdf5-devel                              x86_64  1.12.1-12.fc39                fedora     1.3 M
 hdf5-mpich-devel                        x86_64  1.12.1-12.fc39                fedora     1.3 M
 hdf5-openmpi-devel                      x86_64  1.12.1-12.fc39                fedora     1.3 M
 m4                                      x86_64  1.4.19-7.fc40                 fedora     303 k
 make                                    x86_64  1:4.4.1-2.fc39                fedora     589 k
 mpark-variant-devel                     x86_64  1.4.0-10.fc39                 fedora      27 k
 mpich-devel                             x86_64  4.1.2-5.fc40                  fedora     1.4 M
 netcdf-cxx4-devel                       x86_64  4.3.1-9.fc39                  fedora      73 k
 netcdf-devel                            x86_64  4.9.0-5.fc38                  fedora      99 k
 openmpi-devel                           x86_64  4.1.5-5.fc40                  copr_base  1.2 M
 petsc-mpich-devel                       x86_64  3.19.4-9.fc40                 fedora     4.5 M
 petsc-openmpi-devel                     x86_64  3.19.4-9.fc40                 fedora     6.6 M
 python3                                 x86_64  3.12.0~rc2-1.fc40             fedora      26 k
 python3-boutdata                        noarch  0.1.10-4.fc39                 fedora     187 k
 python3-boututils                       noarch  0.1.10-4.fc39                 fedora     167 k
 python3-cython                          x86_64  3.0.2-1.fc40                  fedora     3.8 M
 python3-devel                           x86_64  3.12.0~rc2-1.fc40             fedora     311 k
 python3-jinja2                          noarch  3.1.2-6.fc40                  fedora     505 k
 python3-netcdf4                         x86_64  1.6.4-3.fc39                  fedora     620 k
 python3-numpy                           x86_64  1:1.24.4-2.fc39               fedora     7.8 M
 python3-scipy                           x86_64  1.11.1-1.fc39                 fedora      16 M
 python3-sphinx                          noarch  1:7.1.2-1.fc40                fedora     2.6 M
 python3-tables                          x86_64  3.8.0-6.fc40                  fedora     1.6 M
 sundials-devel                          x86_64  6.5.1-5.fc40                  fedora     888 k
 sundials-mpich-devel                    x86_64  6.5.1-5.fc40                  fedora     931 k
 sundials-openmpi-devel                  x86_64  6.5.1-5.fc40                  fedora     932 k
 zlib-ng-compat-devel                    x86_64  2.1.3-4.fc40                  copr_base   34 k
Installing dependencies:
 MUMPS-common                            noarch  5.5.1-6.fc40                  fedora     830 k
 MUMPS-mpich                             x86_64  5.5.1-6.fc40                  fedora     1.9 M
 MUMPS-openmpi                           x86_64  5.5.1-6.fc40                  fedora     1.9 M
 SuperLUMT-common                        noarch  3.1.0-36.fc39                 fedora     642 k
 SuperLUMT64-double                      x86_64  3.1.0-36.fc39                 fedora      82 k
 abattis-cantarell-vf-fonts              noarch  0.301-10.fc39                 fedora     121 k
 adobe-mappings-cmap                     noarch  20230622-1.fc39               fedora     2.1 M
 adobe-mappings-cmap-deprecated          noarch  20230622-1.fc39               fedora     113 k
 adobe-mappings-pdf                      noarch  20190401-5.fc39               fedora     698 k
 annobin-docs                            noarch  12.26-1.fc40                  fedora      94 k
 annobin-plugin-gcc                      x86_64  12.26-1.fc40                  fedora     958 k
 avahi-libs                              x86_64  0.8-24.fc39                   fedora      67 k
 blosc                                   x86_64  1.21.4-2.fc40                 copr_base   59 k
 blosc2                                  x86_64  2.10.0-2.fc40                 copr_base  198 k
 cairo                                   x86_64  1.17.8-5.fc40                 copr_base  705 k
 cairo-gobject                           x86_64  1.17.8-5.fc40                 copr_base   19 k
 clang-libs                              x86_64  17.0.0~rc4-1.fc40             fedora      23 M
 clang-resource-filesystem               x86_64  17.0.0~rc4-1.fc40             fedora      13 k
 cmake-data                              noarch  3.27.4-8.fc40                 fedora     2.2 M
 cmake-filesystem                        x86_64  3.27.4-8.fc40                 fedora      19 k
 cmake-rpm-macros                        noarch  3.27.4-8.fc40                 fedora      18 k
 cpp                                     x86_64  13.2.1-1.fc40                 copr_base   11 M
 crypto-policies-scripts                 noarch  20230731-1.git5ed06e0.fc39    fedora     115 k
 cryptsetup-libs                         x86_64  2.6.1-3.fc39                  fedora     491 k
 cups-libs                               x86_64  1:2.4.6-6.fc40                copr_base  267 k
 dbus                                    x86_64  1:1.14.10-1.fc40              fedora     8.1 k
 dbus-broker                             x86_64  33-2.fc39                     fedora     173 k
 dbus-common                             noarch  1:1.14.10-1.fc40              fedora      15 k
 dbus-libs                               x86_64  1:1.14.10-1.fc40              fedora     155 k
 default-fonts-core-sans                 noarch  4.0-9.fc40                    fedora      32 k
 dejavu-sans-fonts                       noarch  2.37-20.fc38                  fedora     1.3 M
 device-mapper                           x86_64  1.02.196-1.fc39               fedora     138 k
 device-mapper-libs                      x86_64  1.02.196-1.fc39               fedora     175 k
 emacs-filesystem                        noarch  1:29.1-1.fc40                 copr_base  8.9 k
 expat                                   x86_64  2.5.0-3.fc39                  fedora     110 k
 fftw                                    x86_64  3.3.10-7.fc39                 fedora      45 k
 fftw-libs                               x86_64  3.3.10-7.fc39                 fedora     7.6 k
 fftw-libs-double                        x86_64  3.3.10-7.fc39                 fedora     1.2 M
 fftw-libs-long                          x86_64  3.3.10-7.fc39                 fedora     505 k
 fftw-libs-quad                          x86_64  3.3.10-7.fc39                 fedora     739 k
 fftw-libs-single                        x86_64  3.3.10-7.fc39                 fedora     1.2 M
 flexiblas                               x86_64  3.3.1-5.fc39                  fedora      33 k
 flexiblas-netlib                        x86_64  3.3.1-5.fc39                  fedora     3.1 M
 flexiblas-netlib64                      x86_64  3.3.1-5.fc39                  fedora     3.0 M
 flexiblas-openblas-openmp               x86_64  3.3.1-5.fc39                  fedora      17 k
 flexiblas-openblas-openmp64             x86_64  3.3.1-5.fc39                  fedora      17 k
 fmt                                     x86_64  10.0.0-3.fc39                 fedora     127 k
 fontconfig                              x86_64  2.14.2-5.fc40                 fedora     297 k
 fonts-filesystem                        noarch  1:2.0.5-12.fc39               fedora     8.2 k
 freetype                                x86_64  2.13.1-2.fc40                 copr_base  414 k
 fribidi                                 x86_64  1.0.13-2.fc39                 fedora      91 k
 gc                                      x86_64  8.2.2-4.fc39                  fedora     110 k
 gcc                                     x86_64  13.2.1-1.fc40                 copr_base   34 M
 gcc-gfortran                            x86_64  13.2.1-1.fc40                 copr_base   12 M
 gcc-plugin-annobin                      x86_64  13.2.1-1.fc40                 copr_base   47 k
 gd                                      x86_64  2.3.3-12.fc40                 copr_base  139 k
 gdk-pixbuf2                             x86_64  2.42.10-5.fc39                fedora     484 k
 gettext                                 x86_64  0.22-2.fc39                   fedora     1.1 M
 gettext-common-devel                    noarch  0.22-2.fc39                   fedora     410 k
 gettext-envsubst                        x86_64  0.22-2.fc39                   fedora      36 k
 gettext-libs                            x86_64  0.22-2.fc39                   fedora     328 k
 gettext-runtime                         x86_64  0.22-2.fc39                   fedora     120 k
 glib2                                   x86_64  2.78.0-2.fc40                 fedora     2.8 M
 glibc-devel                             x86_64  2.38.9000-9.fc40              fedora      89 k
 glibc-headers-x86                       noarch  2.38.9000-9.fc40              fedora     573 k
 gnutls                                  x86_64  3.8.1-1.fc40                  fedora     1.1 M
 google-droid-sans-fonts                 noarch  20200215-17.fc40              fedora     2.7 M
 google-noto-fonts-common                noarch  20230801-3.fc40               fedora      17 k
 google-noto-sans-vf-fonts               noarch  20230801-3.fc40               fedora     583 k
 graphite2                               x86_64  1.3.14-12.fc39                fedora      95 k
 graphviz                                x86_64  8.1.0-6.fc40                  copr_base  5.0 M
 groff-base                              x86_64  1.23.0-2.fc39                 fedora     1.1 M
 gts                                     x86_64  0.7.6-46.20121130.fc39        fedora     240 k
 guile22                                 x86_64  2.2.7-9.fc39                  fedora     6.5 M
 harfbuzz                                x86_64  8.2.0-1.fc40                  fedora     974 k
 hdf-libs                                x86_64  4.2.15-14.fc40                copr_base  295 k
 hdf5                                    x86_64  1.12.1-12.fc39                fedora     2.2 M
 hdf5-mpich                              x86_64  1.12.1-12.fc39                fedora     2.1 M
 hdf5-openmpi                            x86_64  1.12.1-12.fc39                fedora     2.1 M
 highway                                 x86_64  1.0.7-1.fc40                  fedora     481 k
 hwloc-libs                              x86_64  2.9.0-7.fc39                  fedora     2.2 M
 hypre-mpich                             x86_64  2.24.0-8.fc40                 fedora     1.7 M
 hypre-openmpi                           x86_64  2.24.0-8.fc40                 fedora     1.7 M
 infinipath-psm                          x86_64  3.3-26_g604758e_open.6.fc37.6 fedora     198 k
 jbig2dec-libs                           x86_64  0.19-10.fc39                  fedora      73 k
 jbigkit-libs                            x86_64  2.1-26.fc39                   fedora      53 k
 json-c                                  x86_64  0.17-1.fc40                   fedora      43 k
 jsoncpp                                 x86_64  1.9.5-5.fc39                  fedora      99 k
 kbd                                     x86_64  2.6.2-1.fc40                  fedora     432 k
 kbd-legacy                              noarch  2.6.2-1.fc40                  fedora     574 k
 kbd-misc                                noarch  2.6.2-1.fc40                  fedora     1.6 M
 kernel-headers                          x86_64  6.6.0-0.rc2.git0.1.fc40       fedora     1.6 M
 kmod                                    x86_64  30-6.fc40                     copr_base  120 k
 kmod-libs                               x86_64  30-6.fc40                     copr_base   68 k
 lasi                                    x86_64  1.1.3-11.fc39                 fedora      54 k
 lcms2                                   x86_64  2.15-2.fc40                   copr_base  178 k
 less                                    x86_64  643-1.fc40                    fedora     176 k
 libICE                                  x86_64  1.0.10-12.fc40                fedora      70 k
 libSM                                   x86_64  1.2.3-14.fc40                 fedora      41 k
 libX11                                  x86_64  1.8.6-3.fc40                  fedora     650 k
 libX11-common                           noarch  1.8.6-3.fc40                  fedora     175 k
 libXau                                  x86_64  1.0.11-4.fc40                 fedora      31 k
 libXext                                 x86_64  1.3.5-3.fc39                  fedora      39 k
 libXft                                  x86_64  2.3.8-4.fc40                  fedora      72 k
 libXpm                                  x86_64  3.5.15-5.fc40                 fedora      63 k
 libXrender                              x86_64  0.9.11-4.fc40                 fedora      27 k
 libXt                                   x86_64  1.2.1-6.fc40                  fedora     178 k
 libaec                                  x86_64  1.0.6-5.fc39                  fedora      42 k
 libaec-devel                            x86_64  1.0.6-5.fc39                  fedora      12 k
 libaom                                  x86_64  3.7.0-1.fc40                  fedora     1.8 M
 libargon2                               x86_64  20190702-3.fc39               fedora      28 k
 libavif                                 x86_64  0.11.1-11.fc40                copr_base   84 k
 libb2                                   x86_64  0.98.1-9.fc39                 fedora      25 k
 libcbor                                 x86_64  0.10.2-2.fc39                 fedora      58 k
 libcurl-devel                           x86_64  8.3.0-1.fc40                  copr_base  901 k
 libdatrie                               x86_64  0.2.13-7.fc39                 fedora      32 k
 libdav1d                                x86_64  1.2.1-2.fc39                  fedora     618 k
 libedit                                 x86_64  3.1-48.20230828cvs.fc40       fedora     107 k
 libfabric                               x86_64  1.19.0-1.fc40                 fedora     1.6 M
 libfido2                                x86_64  1.13.0-3.fc40                 copr_base   98 k
 libgfortran                             x86_64  13.2.1-1.fc40                 copr_base  903 k
 libgs                                   x86_64  10.01.2-3.fc40                copr_base  3.5 M
 libibumad                               x86_64  46.0-4.fc39                   fedora      26 k
 libibverbs                              x86_64  46.0-4.fc39                   fedora     431 k
 libijs                                  x86_64  0.35-19.fc39                  fedora      29 k
 libimagequant                           x86_64  4.0.1-5.fc39                  fedora     308 k
 libjpeg-turbo                           x86_64  2.1.4-3.fc39                  fedora     183 k
 libjxl                                  x86_64  1:0.8.2-3.fc40                copr_base  1.2 M
 liblerc                                 x86_64  4.0.0-4.fc39                  fedora     201 k
 libmpc                                  x86_64  1.3.1-3.fc39                  fedora      70 k
 libnl3                                  x86_64  3.8.0-1.fc40                  fedora     348 k
 libpaper                                x86_64  1:2.1.1-1.fc39                fedora      27 k
 libpipeline                             x86_64  1.5.7-3.fc39                  fedora      52 k
 libpng                                  x86_64  2:1.6.37-15.fc39              fedora     119 k
 libpsm2                                 x86_64  11.2.230-2.fc39               fedora     200 k
 libqhull_r                              x86_64  1:8.0.2-2.fc40                fedora     199 k
 libquadmath                             x86_64  13.2.1-1.fc40                 copr_base  195 k
 libquadmath-devel                       x86_64  13.2.1-1.fc40                 copr_base   36 k
 libraqm                                 x86_64  0.8.0-5.fc39                  fedora      20 k
 librdmacm                               x86_64  46.0-4.fc39                   fedora      72 k
 librsvg2                                x86_64  2.56.92-1.fc40                fedora     1.6 M
 libseccomp                              x86_64  2.5.3-6.fc39                  fedora      71 k
 libstdc++-devel                         x86_64  13.2.1-1.fc40                 copr_base  2.5 M
 libthai                                 x86_64  0.1.29-6.fc39                 fedora     213 k
 libtiff                                 x86_64  4.4.0-8.fc40                  copr_base  201 k
 libtool-ltdl                            x86_64  2.4.7-8.fc40                  fedora      36 k
 libuv                                   x86_64  1:1.46.0-2.fc39               fedora     159 k
 libvmaf                                 x86_64  2.3.0-6.fc39                  fedora     180 k
 libwebp                                 x86_64  1.3.2-1.fc40                  fedora     284 k
 libxcb                                  x86_64  1.13.1-12.fc39                fedora     233 k
 libxcrypt-devel                         x86_64  4.4.36-2.fc39                 fedora      30 k
 libxslt                                 x86_64  1.1.38-3.fc39                 fedora     187 k
 llvm-libs                               x86_64  17.0.0~rc4-1.fc40             copr_base   27 M
 lzo                                     x86_64  2.10-9.fc40                   copr_base   67 k
 man-db                                  x86_64  2.11.2-5.fc40                 copr_base  1.2 M
 metis                                   x86_64  5.1.0.3-2.fc39                fedora     572 k
 mpdecimal                               x86_64  2.5.1-7.fc39                  fedora      89 k
 mpich                                   x86_64  4.1.2-5.fc40                  fedora     2.1 M
 munge-libs                              x86_64  0.5.15-5.fc40                 copr_base   21 k
 ncurses                                 x86_64  6.4-7.20230520.fc40           fedora     415 k
 netcdf                                  x86_64  4.9.0-5.fc38                  fedora     833 k
 netcdf-cxx4                             x86_64  4.3.1-9.fc39                  fedora      87 k
 netpbm                                  x86_64  11.02.00-2.fc39               fedora     185 k
 nettle                                  x86_64  3.9.1-2.fc39                  fedora     425 k
 nspr                                    x86_64  4.35.0-13.fc40                copr_base  138 k
 nss                                     x86_64  3.93.0-2.fc40                 copr_base  696 k
 nss-softokn                             x86_64  3.93.0-2.fc40                 copr_base  1.0 M
 nss-softokn-freebl                      x86_64  3.93.0-2.fc40                 copr_base  327 k
 nss-sysinit                             x86_64  3.93.0-2.fc40                 copr_base   19 k
 nss-util                                x86_64  3.93.0-2.fc40                 copr_base   87 k
 numactl-libs                            x86_64  2.0.16-3.fc39                 fedora      30 k
 openblas                                x86_64  0.3.21-6.fc39                 fedora      35 k
 openblas-openmp                         x86_64  0.3.21-6.fc39                 fedora     4.9 M
 openblas-openmp64                       x86_64  0.3.21-6.fc39                 fedora     4.8 M
 openjpeg2                               x86_64  2.5.0-4.fc39                  fedora     178 k
 openmpi                                 x86_64  4.1.5-5.fc40                  copr_base  2.7 M
 opensm-libs                             x86_64  3.3.24-6.fc39                 fedora      73 k
 openssh                                 x86_64  9.3p1-10.fc40                 fedora     438 k
 openssh-clients                         x86_64  9.3p1-10.fc40                 fedora     734 k
 orangefs                                x86_64  2.9.8-9.fc39                  fedora     1.8 M
 pango                                   x86_64  1.51.0-1.fc40                 fedora     343 k
 perl-AutoLoader                         noarch  5.74-500.fc39                 fedora      21 k
 perl-B                                  x86_64  1.88-500.fc39                 fedora     177 k
 perl-Carp                               noarch  1.54-500.fc39                 fedora      29 k
 perl-Class-Struct                       noarch  0.68-500.fc39                 fedora      22 k
 perl-Data-Dumper                        x86_64  2.188-501.fc39                fedora      56 k
 perl-Digest                             noarch  1.20-500.fc39                 fedora      25 k
 perl-Digest-MD5                         x86_64  2.58-500.fc39                 fedora      35 k
 perl-DynaLoader                         x86_64  1.54-500.fc39                 fedora      26 k
 perl-Encode                             x86_64  4:3.19-500.fc39               fedora     1.7 M
 perl-Errno                              x86_64  1.37-500.fc39                 fedora      15 k
 perl-Exporter                           noarch  5.77-500.fc39                 fedora      31 k
 perl-Fcntl                              x86_64  1.15-500.fc39                 fedora      20 k
 perl-File-Basename                      noarch  2.86-500.fc39                 fedora      17 k
 perl-File-Path                          noarch  2.18-500.fc39                 fedora      35 k
 perl-File-Temp                          noarch  1:0.231.100-500.fc39          fedora      58 k
 perl-File-stat                          noarch  1.13-500.fc39                 fedora      17 k
 perl-FileHandle                         noarch  2.05-500.fc39                 fedora      16 k
 perl-Getopt-Long                        noarch  1:2.54-500.fc39               fedora      60 k
 perl-Getopt-Std                         noarch  1.13-500.fc39                 fedora      16 k
 perl-HTTP-Tiny                          noarch  0.088-3.fc39                  fedora      56 k
 perl-IO                                 x86_64  1.52-500.fc39                 fedora      82 k
 perl-IO-Socket-IP                       noarch  0.42-1.fc39                   fedora      42 k
 perl-IO-Socket-SSL                      noarch  2.083-3.fc39                  fedora     225 k
 perl-IPC-Open3                          noarch  1.22-500.fc39                 fedora      22 k
 perl-MIME-Base64                        x86_64  3.16-500.fc39                 fedora      29 k
 perl-Mozilla-CA                         noarch  20230821-1.fc40               fedora      13 k
 perl-Net-SSLeay                         x86_64  1.92-10.fc39                  fedora     360 k
 perl-POSIX                              x86_64  2.13-500.fc39                 fedora      97 k
 perl-PathTools                          x86_64  3.89-500.fc39                 fedora      87 k
 perl-Pod-Escapes                        noarch  1:1.07-501.fc40               fedora      19 k
 perl-Pod-Perldoc                        noarch  3.28.01-501.fc39              fedora      86 k
 perl-Pod-Simple                         noarch  1:3.45-4.fc39                 fedora     218 k
 perl-Pod-Usage                          noarch  4:2.03-500.fc39               fedora      39 k
 perl-Scalar-List-Utils                  x86_64  5:1.63-500.fc39               fedora      72 k
 perl-SelectSaver                        noarch  1.02-500.fc39                 fedora      12 k
 perl-Socket                             x86_64  4:2.037-3.fc39                fedora      55 k
 perl-Storable                           x86_64  1:3.32-500.fc39               fedora      99 k
 perl-Symbol                             noarch  1.09-500.fc39                 fedora      14 k
 perl-Term-ANSIColor                     noarch  5.01-501.fc39                 fedora      47 k
 perl-Term-Cap                           noarch  1.18-500.fc39                 fedora      22 k
 perl-Text-ParseWords                    noarch  3.31-500.fc39                 fedora      16 k
 perl-Text-Tabs+Wrap                     noarch  2023.0511-3.fc39              fedora      22 k
 perl-Time-Local                         noarch  2:1.350-3.fc39                fedora      34 k
 perl-URI                                noarch  5.21-1.fc40                   fedora     125 k
 perl-base                               noarch  2.27-500.fc39                 fedora      16 k
 perl-constant                           noarch  1.33-501.fc39                 fedora      22 k
 perl-if                                 noarch  0.61.000-500.fc39             fedora      14 k
 perl-interpreter                        x86_64  4:5.38.0-500.fc39             fedora      72 k
 perl-libnet                             noarch  3.15-501.fc39                 fedora     129 k
 perl-libs                               x86_64  4:5.38.0-500.fc39             fedora     2.3 M
 perl-locale                             noarch  1.10-500.fc39                 fedora      14 k
 perl-mro                                x86_64  1.28-500.fc39                 fedora      29 k
 perl-overload                           noarch  1.37-500.fc39                 fedora      46 k
 perl-overloading                        noarch  0.02-500.fc39                 fedora      13 k
 perl-parent                             noarch  1:0.241-500.fc39              fedora      14 k
 perl-podlators                          noarch  1:5.01-500.fc39               fedora     125 k
 perl-vars                               noarch  1.05-500.fc39                 fedora      13 k
 petsc-mpich                             x86_64  3.19.4-9.fc40                 fedora     7.2 M
 petsc-openmpi                           x86_64  3.19.4-9.fc40                 fedora     7.5 M
 pixman                                  x86_64  0.42.2-2.fc39                 fedora     288 k
 pmix                                    x86_64  4.1.3-1.fc40                  fedora     678 k
 poppler                                 x86_64  23.08.0-1.fc39                fedora     1.2 M
 poppler-data                            noarch  0.4.11-5.fc39                 fedora     2.0 M
 poppler-glib                            x86_64  23.08.0-1.fc39                fedora     185 k
 procps-ng                               x86_64  4.0.3-5.fc40                  fedora     373 k
 ptscotch-mpich                          x86_64  7.0.4-1.fc40                  copr_base  400 k
 ptscotch-mpich-devel                    x86_64  7.0.4-1.fc40                  copr_base   43 k
 ptscotch-mpich-devel-parmetis           x86_64  7.0.4-1.fc40                  copr_base   14 k
 ptscotch-openmpi                        x86_64  7.0.4-1.fc40                  copr_base  403 k
 ptscotch-openmpi-devel                  x86_64  7.0.4-1.fc40                  copr_base   43 k
 pyproject-rpm-macros                    noarch  1.9.0-2.fc39                  fedora      41 k
 python-pip-wheel                        noarch  23.2.1-1.fc39                 fedora     1.5 M
 python-rpm-macros                       noarch  3.12-4.fc40                   fedora      19 k
 python3-appdirs                         noarch  1.4.4-11.fc39                 fedora      23 k
 python3-babel                           noarch  2.12.1-4.fc39~bootstrap       fedora     6.9 M
 python3-blosc2                          x86_64  2.2.5-3.fc39                  fedora     290 k
 python3-brotli                          x86_64  1.1.0-1.fc40                  fedora     337 k
 python3-cairo                           x86_64  1.24.0-2.fc39                 fedora     125 k
 python3-certifi                         noarch  2023.05.07-2.fc39             fedora      14 k
 python3-cftime                          x86_64  1.6.2-1.fc39                  fedora     214 k
 python3-charset-normalizer              noarch  3.2.0-2.fc39                  fedora     105 k
 python3-contourpy                       x86_64  1.1.0-2.fc39                  fedora     237 k
 python3-cpuinfo                         noarch  9.0.0-5.fc39                  fedora      68 k
 python3-cycler                          noarch  0.11.0-9.fc39                 fedora      21 k
 python3-dateutil                        noarch  1:2.8.2-10.fc39               fedora     355 k
 python3-docutils                        noarch  0.20.1-1.fc40                 fedora     1.0 M
 python3-fonttools                       x86_64  4.42.1-1.fc40                 fedora     2.8 M
 python3-fs                              noarch  2.4.16-5.fc39                 fedora     302 k
 python3-idna                            noarch  3.4-5.fc40                    fedora     109 k
 python3-imagesize                       noarch  1.4.1-5.fc40                  fedora      22 k
 python3-kiwisolver                      x86_64  1.4.5-1.fc40                  fedora      68 k
 python3-libs                            x86_64  3.12.0~rc2-1.fc40             fedora     9.2 M
 python3-lxml                            x86_64  4.9.3-2.fc39                  fedora     1.4 M
 python3-markupsafe                      x86_64  2.1.3-2.fc39                  fedora      30 k
 python3-matplotlib                      x86_64  3.8.0-1.fc40                  fedora     4.4 M
 python3-matplotlib-data                 noarch  3.8.0-1.fc40                  fedora     524 k
 python3-matplotlib-data-fonts           noarch  3.8.0-1.fc40                  fedora     2.3 M
 python3-matplotlib-tk                   x86_64  3.8.0-1.fc40                  fedora      47 k
 python3-mpmath                          noarch  1.3.0-3.fc39                  fedora     1.1 M
 python3-msgpack                         x86_64  1.0.5-3.fc39                  fedora     109 k
 python3-natsort                         noarch  7.1.1-10.fc39                 fedora      70 k
 python3-ndindex                         x86_64  1.7-9.fc39                    fedora     753 k
 python3-numexpr                         x86_64  2.8.5-2.fc40                  fedora     165 k
 python3-numpy-f2py                      x86_64  1:1.24.4-2.fc39               fedora     478 k
 python3-olefile                         noarch  0.46-21.fc39                  fedora      66 k
 python3-packaging                       noarch  23.1-5.fc40                   fedora     115 k
 python3-pillow                          x86_64  10.0.1-1.fc40                 fedora     914 k
 python3-pillow-tk                       x86_64  10.0.1-1.fc40                 fedora      29 k
 python3-pooch                           noarch  1.5.2-12.fc39                 fedora     126 k
 python3-pygments                        noarch  2.16.1-1.fc40                 fedora     2.4 M
 python3-pyparsing                       noarch  3.0.9-11.fc39                 fedora     254 k
 python3-pysocks                         noarch  1.7.1-20.fc39                 fedora      39 k
 python3-requests                        noarch  2.28.2-6.fc40                 fedora     151 k
 python3-rpm-generators                  noarch  14-7.fc39                     fedora      30 k
 python3-rpm-macros                      noarch  3.12-4.fc40                   fedora      14 k
 python3-setuptools                      noarch  67.7.2-7.fc40                 fedora     1.5 M
 python3-six                             noarch  1.16.0-12.fc39                fedora      41 k
 python3-snowballstemmer                 noarch  2.2.0-7.fc39                  fedora     257 k
 python3-sphinx-theme-alabaster          noarch  0.7.12-19.fc39                fedora      29 k
 python3-sphinxcontrib-applehelp         noarch  1.0.6-1.fc40                  fedora      45 k
 python3-sphinxcontrib-devhelp           noarch  1.0.2-14.fc39                 fedora      41 k
 python3-sphinxcontrib-htmlhelp          noarch  2.0.3-1.fc40                  fedora      54 k
 python3-sphinxcontrib-jsmath            noarch  1.0.1-22.fc39                 fedora      17 k
 python3-sphinxcontrib-qthelp            noarch  1.0.3-15.fc39                 fedora      47 k
 python3-sphinxcontrib-serializinghtml   noarch  1.1.5-10.fc39                 fedora      47 k
 python3-sympy                           x86_64  1.12-2.fc39                   fedora      14 M
 python3-tkinter                         x86_64  3.12.0~rc2-1.fc40             fedora     407 k
 python3-urllib3                         noarch  1.26.16-3.fc40                fedora     273 k
 python3-urllib3+socks                   noarch  1.26.16-3.fc40                fedora     9.9 k
 rav1e-libs                              x86_64  0.6.6-2.fc39                  fedora     1.0 M
 rhash                                   x86_64  1.4.3-3.fc39                  fedora     194 k
 rpm-mpi-hooks                           noarch  8-6.fc39                      fedora      11 k
 rsvg-pixbuf-loader                      x86_64  2.56.92-1.fc40                fedora      15 k
 scalapack-common                        x86_64  2.2.0-6.fc40                  fedora      18 k
 scalapack-mpich                         x86_64  2.2.0-6.fc40                  fedora     1.7 M
 scalapack-openmpi                       x86_64  2.2.0-6.fc40                  fedora     1.7 M
 shared-mime-info                        x86_64  2.2-4.fc39                    fedora     380 k
 snappy                                  x86_64  1.1.10-2.fc39                 fedora      37 k
 suitesparse                             x86_64  5.13.0-3.fc39                 fedora     1.1 M
 suitesparse64                           x86_64  5.13.0-3.fc39                 fedora     1.1 M
 sundials                                x86_64  6.5.1-5.fc40                  fedora     1.1 M
 sundials-mpich                          x86_64  6.5.1-5.fc40                  fedora     1.2 M
 sundials-openmpi                        x86_64  6.5.1-5.fc40                  fedora     1.2 M
 superlu_dist-mpich                      x86_64  1:8.1.2-6.fc40                fedora     485 k
 superlu_dist-mpich-devel                x86_64  1:8.1.2-6.fc40                fedora     118 k
 superlu_dist-openmpi                    x86_64  1:8.1.2-6.fc40                fedora     489 k
 superlu_dist-openmpi-devel              x86_64  1:8.1.2-6.fc40                fedora     118 k
 svt-av1-libs                            x86_64  1.4.1-3.fc39                  fedora     2.0 M
 systemd                                 x86_64  254.2-7.fc40                  fedora     4.7 M
 systemd-pam                             x86_64  254.2-7.fc40                  fedora     362 k
 systemd-rpm-macros                      noarch  254.2-7.fc40                  fedora      31 k
 systemd-udev                            x86_64  254.2-7.fc40                  fedora     2.1 M
 tcl                                     x86_64  1:8.6.13-1.fc40               copr_base  1.1 M
 tcsh                                    x86_64  6.24.10-2.fc39                fedora     463 k
 tk                                      x86_64  1:8.6.13-1.fc40               fedora     1.6 M
 ucx                                     x86_64  1.14.1-4.fc39                 fedora     781 k
 urw-base35-bookman-fonts                noarch  20200910-18.fc39              fedora     847 k
 urw-base35-c059-fonts                   noarch  20200910-18.fc39              fedora     874 k
 urw-base35-d050000l-fonts               noarch  20200910-18.fc39              fedora      76 k
 urw-base35-fonts                        noarch  20200910-18.fc39              fedora      10 k
 urw-base35-fonts-common                 noarch  20200910-18.fc39              fedora      21 k
 urw-base35-gothic-fonts                 noarch  20200910-18.fc39              fedora     643 k
 urw-base35-nimbus-mono-ps-fonts         noarch  20200910-18.fc39              fedora     795 k
 urw-base35-nimbus-roman-fonts           noarch  20200910-18.fc39              fedora     856 k
 urw-base35-nimbus-sans-fonts            noarch  20200910-18.fc39              fedora     1.3 M
 urw-base35-p052-fonts                   noarch  20200910-18.fc39              fedora     974 k
 urw-base35-standard-symbols-ps-fonts    noarch  20200910-18.fc39              fedora      42 k
 urw-base35-z003-fonts                   noarch  20200910-18.fc39              fedora     276 k
 vim-filesystem                          noarch  2:9.0.1882-1.fc40             fedora      18 k
 xapian-core-libs                        x86_64  1.4.23-1.fc40                 copr_base  771 k
 xml-common                              noarch  0.6.3-61.fc39                 fedora      31 k
 yaksa                                   x86_64  0.2-3.fc37                    fedora     6.5 M
 zlib-ng                                 x86_64  2.1.3-4.fc40                  copr_base   84 k

Transaction Summary
===============================================================================================
Install  390 Packages

Total download size: 425 M
Installed size: 1.6 G
Downloading Packages:
(1/390): blosc-1.21.4-2.fc40.x86_64.rpm         797 kB/s |  59 kB     00:00    
(2/390): blosc2-2.10.0-2.fc40.x86_64.rpm        2.1 MB/s | 198 kB     00:00    
(3/390): cairo-gobject-1.17.8-5.fc40.x86_64.rpm 1.1 MB/s |  19 kB     00:00    
(4/390): cairo-1.17.8-5.fc40.x86_64.rpm         6.6 MB/s | 705 kB     00:00    
(5/390): cups-libs-2.4.6-6.fc40.x86_64.rpm      6.1 MB/s | 267 kB     00:00    
(6/390): emacs-filesystem-29.1-1.fc40.noarch.rp 352 kB/s | 8.9 kB     00:00    
(7/390): doxygen-1.9.8-1.fc40.x86_64.rpm         47 MB/s | 5.3 MB     00:00    
(8/390): freetype-2.13.1-2.fc40.x86_64.rpm      7.3 MB/s | 414 kB     00:00    
(9/390): cpp-13.2.1-1.fc40.x86_64.rpm            39 MB/s |  11 MB     00:00    
(10/390): gcc-c++-13.2.1-1.fc40.x86_64.rpm       26 MB/s |  13 MB     00:00    
(11/390): gcc-gfortran-13.2.1-1.fc40.x86_64.rpm  25 MB/s |  12 MB     00:00    
(12/390): gcc-plugin-annobin-13.2.1-1.fc40.x86_ 357 kB/s |  47 kB     00:00    
(13/390): gcc-13.2.1-1.fc40.x86_64.rpm           42 MB/s |  34 MB     00:00    
(14/390): gd-2.3.3-12.fc40.x86_64.rpm           752 kB/s | 139 kB     00:00    
(15/390): kmod-30-6.fc40.x86_64.rpm             5.5 MB/s | 120 kB     00:00    
(16/390): hdf-libs-4.2.15-14.fc40.x86_64.rpm     10 MB/s | 295 kB     00:00    
(17/390): kmod-libs-30-6.fc40.x86_64.rpm        5.4 MB/s |  68 kB     00:00    
(18/390): lcms2-2.15-2.fc40.x86_64.rpm          2.3 MB/s | 178 kB     00:00    
(19/390): graphviz-8.1.0-6.fc40.x86_64.rpm       16 MB/s | 5.0 MB     00:00    
(20/390): libavif-0.11.1-11.fc40.x86_64.rpm     867 kB/s |  84 kB     00:00    
(21/390): libcurl-devel-8.3.0-1.fc40.x86_64.rpm  15 MB/s | 901 kB     00:00    
(22/390): libfido2-1.13.0-3.fc40.x86_64.rpm     2.1 MB/s |  98 kB     00:00    
(23/390): libjxl-0.8.2-3.fc40.x86_64.rpm         11 MB/s | 1.2 MB     00:00    
(24/390): libquadmath-13.2.1-1.fc40.x86_64.rpm  9.3 MB/s | 195 kB     00:00    
(25/390): libquadmath-devel-13.2.1-1.fc40.x86_6 2.2 MB/s |  36 kB     00:00    
(26/390): libgfortran-13.2.1-1.fc40.x86_64.rpm  4.0 MB/s | 903 kB     00:00    
(27/390): libgs-10.01.2-3.fc40.x86_64.rpm        15 MB/s | 3.5 MB     00:00    
(28/390): libtiff-4.4.0-8.fc40.x86_64.rpm       792 kB/s | 201 kB     00:00    
(29/390): libstdc++-devel-13.2.1-1.fc40.x86_64. 7.9 MB/s | 2.5 MB     00:00    
(30/390): lzo-2.10-9.fc40.x86_64.rpm            475 kB/s |  67 kB     00:00    
(31/390): man-db-2.11.2-5.fc40.x86_64.rpm       9.6 MB/s | 1.2 MB     00:00    
(32/390): llvm-libs-17.0.0~rc4-1.fc40.x86_64.rp  58 MB/s |  27 MB     00:00    
(33/390): munge-libs-0.5.15-5.fc40.x86_64.rpm   182 kB/s |  21 kB     00:00    
(34/390): nspr-4.35.0-13.fc40.x86_64.rpm        1.4 MB/s | 138 kB     00:00    
(35/390): nss-3.93.0-2.fc40.x86_64.rpm           28 MB/s | 696 kB     00:00    
(36/390): nss-softokn-freebl-3.93.0-2.fc40.x86_  13 MB/s | 327 kB     00:00    
(37/390): nss-softokn-3.93.0-2.fc40.x86_64.rpm   25 MB/s | 1.0 MB     00:00    
(38/390): nss-util-3.93.0-2.fc40.x86_64.rpm     4.8 MB/s |  87 kB     00:00    
(39/390): nss-sysinit-3.93.0-2.fc40.x86_64.rpm  164 kB/s |  19 kB     00:00    
(40/390): openmpi-devel-4.1.5-5.fc40.x86_64.rpm  11 MB/s | 1.2 MB     00:00    
(41/390): openmpi-4.1.5-5.fc40.x86_64.rpm        15 MB/s | 2.7 MB     00:00    
(42/390): ptscotch-mpich-devel-7.0.4-1.fc40.x86 682 kB/s |  43 kB     00:00    
(43/390): ptscotch-mpich-7.0.4-1.fc40.x86_64.rp 4.8 MB/s | 400 kB     00:00    
(44/390): ptscotch-mpich-devel-parmetis-7.0.4-1 965 kB/s |  14 kB     00:00    
(45/390): tcl-8.6.13-1.fc40.x86_64.rpm           38 MB/s | 1.1 MB     00:00    
(46/390): xapian-core-libs-1.4.23-1.fc40.x86_64  22 MB/s | 771 kB     00:00    
(47/390): ptscotch-openmpi-devel-7.0.4-1.fc40.x 517 kB/s |  43 kB     00:00    
(48/390): ptscotch-openmpi-7.0.4-1.fc40.x86_64. 4.6 MB/s | 403 kB     00:00    
(49/390): zlib-ng-compat-devel-2.1.3-4.fc40.x86 1.8 MB/s |  34 kB     00:00    
(50/390): zlib-ng-2.1.3-4.fc40.x86_64.rpm       596 kB/s |  84 kB     00:00    
(51/390): MUMPS-common-5.5.1-6.fc40.noarch.rpm  2.1 MB/s | 830 kB     00:00    
(52/390): SuperLUMT-common-3.1.0-36.fc39.noarch 9.1 MB/s | 642 kB     00:00    
(53/390): MUMPS-mpich-5.5.1-6.fc40.x86_64.rpm   4.3 MB/s | 1.9 MB     00:00    
(54/390): SuperLUMT64-double-3.1.0-36.fc39.x86_ 1.5 MB/s |  82 kB     00:00    
(55/390): abattis-cantarell-vf-fonts-0.301-10.f 2.2 MB/s | 121 kB     00:00    
(56/390): adobe-mappings-cmap-deprecated-202306 1.8 MB/s | 113 kB     00:00    
(57/390): MUMPS-openmpi-5.5.1-6.fc40.x86_64.rpm 4.3 MB/s | 1.9 MB     00:00    
(58/390): adobe-mappings-cmap-20230622-1.fc39.n 9.4 MB/s | 2.1 MB     00:00    
(59/390): adobe-mappings-pdf-20190401-5.fc39.no 4.2 MB/s | 698 kB     00:00    
(60/390): annobin-docs-12.26-1.fc40.noarch.rpm  481 kB/s |  94 kB     00:00    
(61/390): avahi-libs-0.8-24.fc39.x86_64.rpm     1.3 MB/s |  67 kB     00:00    
(62/390): annobin-plugin-gcc-12.26-1.fc40.x86_6  16 MB/s | 958 kB     00:00    
(63/390): chrpath-0.16-21.fc39.x86_64.rpm       680 kB/s |  30 kB     00:00    
(64/390): clang-resource-filesystem-17.0.0~rc4- 279 kB/s |  13 kB     00:00    
(65/390): cmake-data-3.27.4-8.fc40.noarch.rpm    13 MB/s | 2.2 MB     00:00    
(66/390): cmake-filesystem-3.27.4-8.fc40.x86_64 308 kB/s |  19 kB     00:00    
(67/390): cmake-rpm-macros-3.27.4-8.fc40.noarch 415 kB/s |  18 kB     00:00    
(68/390): cmake-3.27.4-8.fc40.x86_64.rpm         23 MB/s | 8.0 MB     00:00    
(69/390): cryptsetup-libs-2.6.1-3.fc39.x86_64.r 9.3 MB/s | 491 kB     00:00    
(70/390): crypto-policies-scripts-20230731-1.gi 1.1 MB/s | 115 kB     00:00    
(71/390): dbus-1.14.10-1.fc40.x86_64.rpm        182 kB/s | 8.1 kB     00:00    
(72/390): dbus-broker-33-2.fc39.x86_64.rpm      2.1 MB/s | 173 kB     00:00    
(73/390): dbus-common-1.14.10-1.fc40.noarch.rpm 332 kB/s |  15 kB     00:00    
(74/390): default-fonts-core-sans-4.0-9.fc40.no 717 kB/s |  32 kB     00:00    
(75/390): clang-libs-17.0.0~rc4-1.fc40.x86_64.r  38 MB/s |  23 MB     00:00    
(76/390): dbus-libs-1.14.10-1.fc40.x86_64.rpm   1.8 MB/s | 155 kB     00:00    
(77/390): dejavu-sans-fonts-2.37-20.fc38.noarch  23 MB/s | 1.3 MB     00:00    
(78/390): device-mapper-libs-1.02.196-1.fc39.x8 3.5 MB/s | 175 kB     00:00    
(79/390): device-mapper-1.02.196-1.fc39.x86_64. 1.8 MB/s | 138 kB     00:00    
(80/390): environment-modules-5.3.1-2.fc39.x86_  13 MB/s | 703 kB     00:00    
(81/390): expat-2.5.0-3.fc39.x86_64.rpm         2.2 MB/s | 110 kB     00:00    
(82/390): fftw-devel-3.3.10-7.fc39.x86_64.rpm   2.9 MB/s | 134 kB     00:00    
(83/390): fftw-3.3.10-7.fc39.x86_64.rpm         863 kB/s |  45 kB     00:00    
(84/390): fftw-libs-3.3.10-7.fc39.x86_64.rpm    175 kB/s | 7.6 kB     00:00    
(85/390): fftw-libs-double-3.3.10-7.fc39.x86_64  21 MB/s | 1.2 MB     00:00    
(86/390): fftw-libs-quad-3.3.10-7.fc39.x86_64.r  12 MB/s | 739 kB     00:00    
(87/390): fftw-libs-single-3.3.10-7.fc39.x86_64  22 MB/s | 1.2 MB     00:00    
(88/390): flexiblas-3.3.1-5.fc39.x86_64.rpm     698 kB/s |  33 kB     00:00    
(89/390): fftw-libs-long-3.3.10-7.fc39.x86_64.r 3.6 MB/s | 505 kB     00:00    
(90/390): flexiblas-devel-3.3.1-5.fc39.x86_64.r 2.5 MB/s | 117 kB     00:00    
(91/390): flexiblas-openblas-openmp-3.3.1-5.fc3 321 kB/s |  17 kB     00:00    
(92/390): flexiblas-openblas-openmp64-3.3.1-5.f 357 kB/s |  17 kB     00:00    
(93/390): flexiblas-netlib-3.3.1-5.fc39.x86_64.  21 MB/s | 3.1 MB     00:00    
(94/390): fmt-10.0.0-3.fc39.x86_64.rpm          2.4 MB/s | 127 kB     00:00    
(95/390): fmt-devel-10.0.0-3.fc39.x86_64.rpm    2.7 MB/s | 128 kB     00:00    
(96/390): fontconfig-2.14.2-5.fc40.x86_64.rpm   6.0 MB/s | 297 kB     00:00    
(97/390): fonts-filesystem-2.0.5-12.fc39.noarch 188 kB/s | 8.2 kB     00:00    
(98/390): fribidi-1.0.13-2.fc39.x86_64.rpm      2.0 MB/s |  91 kB     00:00    
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(135/390): kbd-2.6.2-1.fc40.x86_64.rpm          8.1 MB/s | 432 kB     00:00    
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(139/390): lasi-1.1.3-11.fc39.x86_64.rpm        1.1 MB/s |  54 kB     00:00    
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(157/390): libdatrie-0.2.13-7.fc39.x86_64.rpm   723 kB/s |  32 kB     00:00    
(158/390): libdav1d-1.2.1-2.fc39.x86_64.rpm      11 MB/s | 618 kB     00:00    
(159/390): libedit-3.1-48.20230828cvs.fc40.x86_ 2.1 MB/s | 107 kB     00:00    
(160/390): libibumad-46.0-4.fc39.x86_64.rpm     595 kB/s |  26 kB     00:00    
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(162/390): libibverbs-46.0-4.fc39.x86_64.rpm    5.6 MB/s | 431 kB     00:00    
(163/390): libijs-0.35-19.fc39.x86_64.rpm       670 kB/s |  29 kB     00:00    
(164/390): libimagequant-4.0.1-5.fc39.x86_64.rp 5.8 MB/s | 308 kB     00:00    
(165/390): liblerc-4.0.0-4.fc39.x86_64.rpm      4.1 MB/s | 201 kB     00:00    
(166/390): libjpeg-turbo-2.1.4-3.fc39.x86_64.rp 3.0 MB/s | 183 kB     00:00    
(167/390): libmpc-1.3.1-3.fc39.x86_64.rpm       1.6 MB/s |  70 kB     00:00    
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(170/390): libpipeline-1.5.7-3.fc39.x86_64.rpm  1.1 MB/s |  52 kB     00:00    
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(172/390): libpsm2-11.2.230-2.fc39.x86_64.rpm   3.3 MB/s | 200 kB     00:00    
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(175/390): librdmacm-46.0-4.fc39.x86_64.rpm     1.2 MB/s |  72 kB     00:00    
(176/390): libthai-0.1.29-6.fc39.x86_64.rpm     3.3 MB/s | 213 kB     00:00    
(177/390): librsvg2-2.56.92-1.fc40.x86_64.rpm    13 MB/s | 1.6 MB     00:00    
(178/390): libtool-ltdl-2.4.7-8.fc40.x86_64.rpm 771 kB/s |  36 kB     00:00    
(179/390): libseccomp-2.5.3-6.fc39.x86_64.rpm   508 kB/s |  71 kB     00:00    
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(181/390): libvmaf-2.3.0-6.fc39.x86_64.rpm      3.0 MB/s | 180 kB     00:00    
(182/390): libxcb-1.13.1-12.fc39.x86_64.rpm     4.4 MB/s | 233 kB     00:00    
(183/390): libxcrypt-devel-4.4.36-2.fc39.x86_64 667 kB/s |  30 kB     00:00    
(184/390): libxslt-1.1.38-3.fc39.x86_64.rpm     3.7 MB/s | 187 kB     00:00    
(185/390): m4-1.4.19-7.fc40.x86_64.rpm          4.4 MB/s | 303 kB     00:00    
(186/390): make-4.4.1-2.fc39.x86_64.rpm         9.3 MB/s | 589 kB     00:00    
(187/390): mpark-variant-devel-1.4.0-10.fc39.x8 603 kB/s |  27 kB     00:00    
(188/390): metis-5.1.0.3-2.fc39.x86_64.rpm      6.5 MB/s | 572 kB     00:00    
(189/390): mpdecimal-2.5.1-7.fc39.x86_64.rpm    1.8 MB/s |  89 kB     00:00    
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(191/390): mpich-4.1.2-5.fc40.x86_64.rpm         10 MB/s | 2.1 MB     00:00    
(192/390): ncurses-6.4-7.20230520.fc40.x86_64.r 5.6 MB/s | 415 kB     00:00    
(193/390): libwebp-1.3.2-1.fc40.x86_64.rpm      572 kB/s | 284 kB     00:00    
(194/390): netcdf-cxx4-4.3.1-9.fc39.x86_64.rpm  1.6 MB/s |  87 kB     00:00    
(195/390): netcdf-4.9.0-5.fc38.x86_64.rpm       8.1 MB/s | 833 kB     00:00    
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(198/390): netcdf-cxx4-devel-4.3.1-9.fc39.x86_6 621 kB/s |  73 kB     00:00    
(199/390): numactl-libs-2.0.16-3.fc39.x86_64.rp 556 kB/s |  30 kB     00:00    
(200/390): nettle-3.9.1-2.fc39.x86_64.rpm       5.4 MB/s | 425 kB     00:00    
(201/390): openblas-0.3.21-6.fc39.x86_64.rpm    435 kB/s |  35 kB     00:00    
(202/390): openjpeg2-2.5.0-4.fc39.x86_64.rpm    878 kB/s | 178 kB     00:00    
(203/390): openblas-openmp64-0.3.21-6.fc39.x86_  15 MB/s | 4.8 MB     00:00    
(204/390): opensm-libs-3.3.24-6.fc39.x86_64.rpm 743 kB/s |  73 kB     00:00    
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(206/390): openssh-9.3p1-10.fc40.x86_64.rpm     6.4 MB/s | 438 kB     00:00    
(207/390): pango-1.51.0-1.fc40.x86_64.rpm       4.9 MB/s | 343 kB     00:00    
(208/390): orangefs-2.9.8-9.fc39.x86_64.rpm      14 MB/s | 1.8 MB     00:00    
(209/390): perl-AutoLoader-5.74-500.fc39.noarch 478 kB/s |  21 kB     00:00    
(210/390): perl-B-1.88-500.fc39.x86_64.rpm      3.4 MB/s | 177 kB     00:00    
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(215/390): perl-Digest-MD5-2.58-500.fc39.x86_64 737 kB/s |  35 kB     00:00    
(216/390): perl-DynaLoader-1.54-500.fc39.x86_64 574 kB/s |  26 kB     00:00    
(217/390): perl-Errno-1.37-500.fc39.x86_64.rpm  292 kB/s |  15 kB     00:00    
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(220/390): openssh-clients-9.3p1-10.fc40.x86_64 1.5 MB/s | 734 kB     00:00    
(221/390): perl-Fcntl-1.15-500.fc39.x86_64.rpm  419 kB/s |  20 kB     00:00    
(222/390): perl-File-Basename-2.86-500.fc39.noa 340 kB/s |  17 kB     00:00    
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(233/390): perl-IPC-Open3-1.22-500.fc39.noarch. 406 kB/s |  22 kB     00:00    
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(238/390): perl-POSIX-2.13-500.fc39.x86_64.rpm  1.1 MB/s |  97 kB     00:00    
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(258/390): perl-locale-1.10-500.fc39.noarch.rpm 261 kB/s |  14 kB     00:00    
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(267/390): petsc-openmpi-3.19.4-9.fc40.x86_64.r  15 MB/s | 7.5 MB     00:00    
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(286/390): python3-cairo-1.24.0-2.fc39.x86_64.r 775 kB/s | 125 kB     00:00    
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(306/390): python3-libs-3.12.0~rc2-1.fc40.x86_6  13 MB/s | 9.2 MB     00:00    
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(311/390): python3-mpmath-1.3.0-3.fc39.noarch.r  11 MB/s | 1.1 MB     00:00    
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(314/390): python3-numexpr-2.8.5-2.fc40.x86_64. 3.1 MB/s | 165 kB     00:00    
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(317/390): python3-numpy-f2py-1.24.4-2.fc39.x86 1.2 MB/s | 478 kB     00:00    
(318/390): python3-olefile-0.46-21.fc39.noarch. 1.2 MB/s |  66 kB     00:00    
(319/390): python3-packaging-23.1-5.fc40.noarch 1.6 MB/s | 115 kB     00:00    
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(324/390): python3-pyparsing-3.0.9-11.fc39.noar 3.9 MB/s | 254 kB     00:00    
(325/390): python3-pysocks-1.7.1-20.fc39.noarch 863 kB/s |  39 kB     00:00    
(326/390): python3-requests-2.28.2-6.fc40.noarc 2.7 MB/s | 151 kB     00:00    
(327/390): python3-rpm-generators-14-7.fc39.noa 679 kB/s |  30 kB     00:00    
(328/390): python3-rpm-macros-3.12-4.fc40.noarc 321 kB/s |  14 kB     00:00    
(329/390): python3-setuptools-67.7.2-7.fc40.noa 8.8 MB/s | 1.5 MB     00:00    
(330/390): python3-six-1.16.0-12.fc39.noarch.rp 852 kB/s |  41 kB     00:00    
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(332/390): python3-pygments-2.16.1-1.fc40.noarc 5.0 MB/s | 2.4 MB     00:00    
(333/390): python3-sphinx-theme-alabaster-0.7.1 579 kB/s |  29 kB     00:00    
(334/390): python3-sphinxcontrib-applehelp-1.0. 856 kB/s |  45 kB     00:00    
(335/390): python3-sphinxcontrib-devhelp-1.0.2- 698 kB/s |  41 kB     00:00    
(336/390): python3-sphinx-7.1.2-1.fc40.noarch.r 8.6 MB/s | 2.6 MB     00:00    
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(338/390): python3-sphinxcontrib-jsmath-1.0.1-2 304 kB/s |  17 kB     00:00    
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(341/390): python3-sphinxcontrib-htmlhelp-2.0.3 173 kB/s |  54 kB     00:00    
(342/390): python3-tkinter-3.12.0~rc2-1.fc40.x8 2.6 MB/s | 407 kB     00:00    
(343/390): python3-tables-3.8.0-6.fc40.x86_64.r 8.1 MB/s | 1.6 MB     00:00    
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(345/390): rav1e-libs-0.6.6-2.fc39.x86_64.rpm   6.8 MB/s | 1.0 MB     00:00    
(346/390): python3-urllib3+socks-1.26.16-3.fc40  16 kB/s | 9.9 kB     00:00    
(347/390): rpm-mpi-hooks-8-6.fc39.noarch.rpm    221 kB/s |  11 kB     00:00    
(348/390): rsvg-pixbuf-loader-2.56.92-1.fc40.x8 278 kB/s |  15 kB     00:00    
(349/390): scalapack-common-2.2.0-6.fc40.x86_64 171 kB/s |  18 kB     00:00    
(350/390): rhash-1.4.3-3.fc39.x86_64.rpm        410 kB/s | 194 kB     00:00    
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(352/390): scalapack-mpich-2.2.0-6.fc40.x86_64. 5.2 MB/s | 1.7 MB     00:00    
(353/390): shared-mime-info-2.2-4.fc39.x86_64.r 5.3 MB/s | 380 kB     00:00    
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(361/390): sundials-mpich-6.5.1-5.fc40.x86_64.r 5.9 MB/s | 1.2 MB     00:00    
(362/390): sundials-mpich-devel-6.5.1-5.fc40.x8 4.6 MB/s | 931 kB     00:00    
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(364/390): sundials-openmpi-devel-6.5.1-5.fc40. 8.5 MB/s | 932 kB     00:00    
(365/390): superlu_dist-mpich-8.1.2-6.fc40.x86_ 5.1 MB/s | 485 kB     00:00    
(366/390): superlu_dist-openmpi-devel-8.1.2-6.f 2.3 MB/s | 118 kB     00:00    
(367/390): superlu_dist-openmpi-8.1.2-6.fc40.x8 4.1 MB/s | 489 kB     00:00    
(368/390): systemd-pam-254.2-7.fc40.x86_64.rpm  3.5 MB/s | 362 kB     00:00    
(369/390): svt-av1-libs-1.4.1-3.fc39.x86_64.rpm 8.7 MB/s | 2.0 MB     00:00    
(370/390): systemd-rpm-macros-254.2-7.fc40.noar 617 kB/s |  31 kB     00:00    
(371/390): tcsh-6.24.10-2.fc39.x86_64.rpm       3.9 MB/s | 463 kB     00:00    
(372/390): systemd-254.2-7.fc40.x86_64.rpm       11 MB/s | 4.7 MB     00:00    
(373/390): ucx-1.14.1-4.fc39.x86_64.rpm         5.0 MB/s | 781 kB     00:00    
(374/390): tk-8.6.13-1.fc40.x86_64.rpm          4.9 MB/s | 1.6 MB     00:00    
(375/390): urw-base35-bookman-fonts-20200910-18 8.9 MB/s | 847 kB     00:00    
(376/390): urw-base35-d050000l-fonts-20200910-1 1.4 MB/s |  76 kB     00:00    
(377/390): urw-base35-fonts-20200910-18.fc39.no 198 kB/s |  10 kB     00:00    
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(379/390): systemd-udev-254.2-7.fc40.x86_64.rpm 3.3 MB/s | 2.1 MB     00:00    
(380/390): urw-base35-nimbus-mono-ps-fonts-2020 6.7 MB/s | 795 kB     00:00    
(381/390): urw-base35-gothic-fonts-20200910-18. 4.7 MB/s | 643 kB     00:00    
(382/390): urw-base35-nimbus-roman-fonts-202009 6.9 MB/s | 856 kB     00:00    
(383/390): urw-base35-fonts-common-20200910-18.  73 kB/s |  21 kB     00:00    
(384/390): urw-base35-standard-symbols-ps-fonts 936 kB/s |  42 kB     00:00    
(385/390): urw-base35-nimbus-sans-fonts-2020091 6.3 MB/s | 1.3 MB     00:00    
(386/390): urw-base35-z003-fonts-20200910-18.fc 3.8 MB/s | 276 kB     00:00    
(387/390): xml-common-0.6.3-61.fc39.noarch.rpm  571 kB/s |  31 kB     00:00    
(388/390): urw-base35-p052-fonts-20200910-18.fc 5.0 MB/s | 974 kB     00:00    
(389/390): vim-filesystem-9.0.1882-1.fc40.noarc 112 kB/s |  18 kB     00:00    
(390/390): yaksa-0.2-3.fc37.x86_64.rpm           13 MB/s | 6.5 MB     00:00    
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Total                                            23 MB/s | 425 MB     00:18     
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  Installing       : make-1:4.4.1-2.fc39.x86_64                         306/390 
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  Installing       : systemd-254.2-7.fc40.x86_64                        328/390 
  Running scriptlet: systemd-254.2-7.fc40.x86_64                        328/390 
Creating group 'input' with GID 104.
Creating group 'kvm' with GID 36.
Creating group 'render' with GID 105.
Creating group 'sgx' with GID 106.
Creating group 'systemd-journal' with GID 190.
Creating group 'systemd-oom' with GID 999.
Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 999 and GID 999.
Failed to copy permissions from /etc/group to /etc/.#group58dcf1257446da82: No such file or directory

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  Installing       : annobin-docs-12.26-1.fc40.noarch                   331/390 
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  Installing       : libgs-10.01.2-3.fc40.x86_64                        333/390 
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  Installing       : python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noar   336/390 
  Installing       : python3-sphinx-1:7.1.2-1.fc40.noarch               337/390 
  Installing       : SuperLUMT-common-3.1.0-36.fc39.noarch              338/390 
  Installing       : SuperLUMT64-double-3.1.0-36.fc39.x86_64            339/390 
  Installing       : sundials-6.5.1-5.fc40.x86_64                       340/390 
  Installing       : sundials-mpich-6.5.1-5.fc40.x86_64                 341/390 
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  Installing       : xapian-core-libs-1.4.23-1.fc40.x86_64              345/390 
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  Installing       : lzo-2.10-9.fc40.x86_64                             348/390 
  Installing       : libstdc++-devel-13.2.1-1.fc40.x86_64               349/390 
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  Installing       : netcdf-devel-4.9.0-5.fc38.x86_64                   351/390 
  Installing       : kmod-30-6.fc40.x86_64                              352/390 
  Installing       : systemd-udev-254.2-7.fc40.x86_64                   353/390 
  Running scriptlet: systemd-udev-254.2-7.fc40.x86_64                   353/390 
Created symlink /etc/systemd/system/dbus-org.freedesktop.home1.service → /usr/lib/systemd/system/systemd-homed.service.
Created symlink /etc/systemd/system/multi-user.target.wants/systemd-homed.service → /usr/lib/systemd/system/systemd-homed.service.
Created symlink /etc/systemd/system/systemd-homed.service.wants/systemd-homed-activate.service → /usr/lib/systemd/system/systemd-homed-activate.service.
Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /usr/lib/systemd/system/systemd-pstore.service.
Created symlink /etc/systemd/system/multi-user.target.wants/remote-cryptsetup.target → /usr/lib/systemd/system/remote-cryptsetup.target.

  Installing       : infinipath-psm-3.3-26_g604758e_open.6.fc37.6.x86   354/390 
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  Installing       : fftw-devel-3.3.10-7.fc39.x86_64                    386/390 
  Installing       : mpark-variant-devel-1.4.0-10.fc39.x86_64           387/390 
  Installing       : systemd-rpm-macros-254.2-7.fc40.noarch             388/390 
  Installing       : m4-1.4.19-7.fc40.x86_64                            389/390 
  Installing       : chrpath-0.16-21.fc39.x86_64                        390/390 
  Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch   390/390 
  Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch      390/390 
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Creating group 'input' with GID 104.
Creating group 'kvm' with GID 36.
Creating group 'render' with GID 105.
Creating group 'sgx' with GID 106.
Creating group 'systemd-journal' with GID 190.
Creating group 'systemd-coredump' with GID 999.
Creating user 'systemd-coredump' (systemd Core Dumper) with UID 999 and GID 999.
Creating group 'systemd-oom' with GID 998.
Creating user 'systemd-oom' (systemd Userspace OOM Killer) with UID 998 and GID 998.
Creating group 'systemd-timesync' with GID 997.
Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997.
Failed to copy permissions from /etc/group to /etc/.#groupb974058bf10991e1: No such file or directory

Failed to write database /etc/udev/hwdb.bin: No such file or directory

  Verifying        : blosc-1.21.4-2.fc40.x86_64                           1/390 
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  Verifying        : libseccomp-2.5.3-6.fc39.x86_64                     177/390 
  Verifying        : libthai-0.1.29-6.fc39.x86_64                       178/390 
  Verifying        : libtool-ltdl-2.4.7-8.fc40.x86_64                   179/390 
  Verifying        : libuv-1:1.46.0-2.fc39.x86_64                       180/390 
  Verifying        : libvmaf-2.3.0-6.fc39.x86_64                        181/390 
  Verifying        : libwebp-1.3.2-1.fc40.x86_64                        182/390 
  Verifying        : libxcb-1.13.1-12.fc39.x86_64                       183/390 
  Verifying        : libxcrypt-devel-4.4.36-2.fc39.x86_64               184/390 
  Verifying        : libxslt-1.1.38-3.fc39.x86_64                       185/390 
  Verifying        : m4-1.4.19-7.fc40.x86_64                            186/390 
  Verifying        : make-1:4.4.1-2.fc39.x86_64                         187/390 
  Verifying        : metis-5.1.0.3-2.fc39.x86_64                        188/390 
  Verifying        : mpark-variant-devel-1.4.0-10.fc39.x86_64           189/390 
  Verifying        : mpdecimal-2.5.1-7.fc39.x86_64                      190/390 
  Verifying        : mpich-4.1.2-5.fc40.x86_64                          191/390 
  Verifying        : mpich-devel-4.1.2-5.fc40.x86_64                    192/390 
  Verifying        : ncurses-6.4-7.20230520.fc40.x86_64                 193/390 
  Verifying        : netcdf-4.9.0-5.fc38.x86_64                         194/390 
  Verifying        : netcdf-cxx4-4.3.1-9.fc39.x86_64                    195/390 
  Verifying        : netcdf-cxx4-devel-4.3.1-9.fc39.x86_64              196/390 
  Verifying        : netcdf-devel-4.9.0-5.fc38.x86_64                   197/390 
  Verifying        : netpbm-11.02.00-2.fc39.x86_64                      198/390 
  Verifying        : nettle-3.9.1-2.fc39.x86_64                         199/390 
  Verifying        : numactl-libs-2.0.16-3.fc39.x86_64                  200/390 
  Verifying        : openblas-0.3.21-6.fc39.x86_64                      201/390 
  Verifying        : openblas-openmp-0.3.21-6.fc39.x86_64               202/390 
  Verifying        : openblas-openmp64-0.3.21-6.fc39.x86_64             203/390 
  Verifying        : openjpeg2-2.5.0-4.fc39.x86_64                      204/390 
  Verifying        : opensm-libs-3.3.24-6.fc39.x86_64                   205/390 
  Verifying        : openssh-9.3p1-10.fc40.x86_64                       206/390 
  Verifying        : openssh-clients-9.3p1-10.fc40.x86_64               207/390 
  Verifying        : orangefs-2.9.8-9.fc39.x86_64                       208/390 
  Verifying        : pango-1.51.0-1.fc40.x86_64                         209/390 
  Verifying        : perl-AutoLoader-5.74-500.fc39.noarch               210/390 
  Verifying        : perl-B-1.88-500.fc39.x86_64                        211/390 
  Verifying        : perl-Carp-1.54-500.fc39.noarch                     212/390 
  Verifying        : perl-Class-Struct-0.68-500.fc39.noarch             213/390 
  Verifying        : perl-Data-Dumper-2.188-501.fc39.x86_64             214/390 
  Verifying        : perl-Digest-1.20-500.fc39.noarch                   215/390 
  Verifying        : perl-Digest-MD5-2.58-500.fc39.x86_64               216/390 
  Verifying        : perl-DynaLoader-1.54-500.fc39.x86_64               217/390 
  Verifying        : perl-Encode-4:3.19-500.fc39.x86_64                 218/390 
  Verifying        : perl-Errno-1.37-500.fc39.x86_64                    219/390 
  Verifying        : perl-Exporter-5.77-500.fc39.noarch                 220/390 
  Verifying        : perl-Fcntl-1.15-500.fc39.x86_64                    221/390 
  Verifying        : perl-File-Basename-2.86-500.fc39.noarch            222/390 
  Verifying        : perl-File-Path-2.18-500.fc39.noarch                223/390 
  Verifying        : perl-File-Temp-1:0.231.100-500.fc39.noarch         224/390 
  Verifying        : perl-File-stat-1.13-500.fc39.noarch                225/390 
  Verifying        : perl-FileHandle-2.05-500.fc39.noarch               226/390 
  Verifying        : perl-Getopt-Long-1:2.54-500.fc39.noarch            227/390 
  Verifying        : perl-Getopt-Std-1.13-500.fc39.noarch               228/390 
  Verifying        : perl-HTTP-Tiny-0.088-3.fc39.noarch                 229/390 
  Verifying        : perl-IO-1.52-500.fc39.x86_64                       230/390 
  Verifying        : perl-IO-Socket-IP-0.42-1.fc39.noarch               231/390 
  Verifying        : perl-IO-Socket-SSL-2.083-3.fc39.noarch             232/390 
  Verifying        : perl-IPC-Open3-1.22-500.fc39.noarch                233/390 
  Verifying        : perl-MIME-Base64-3.16-500.fc39.x86_64              234/390 
  Verifying        : perl-Mozilla-CA-20230821-1.fc40.noarch             235/390 
  Verifying        : perl-Net-SSLeay-1.92-10.fc39.x86_64                236/390 
  Verifying        : perl-POSIX-2.13-500.fc39.x86_64                    237/390 
  Verifying        : perl-PathTools-3.89-500.fc39.x86_64                238/390 
  Verifying        : perl-Pod-Escapes-1:1.07-501.fc40.noarch            239/390 
  Verifying        : perl-Pod-Perldoc-3.28.01-501.fc39.noarch           240/390 
  Verifying        : perl-Pod-Simple-1:3.45-4.fc39.noarch               241/390 
  Verifying        : perl-Pod-Usage-4:2.03-500.fc39.noarch              242/390 
  Verifying        : perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64      243/390 
  Verifying        : perl-SelectSaver-1.02-500.fc39.noarch              244/390 
  Verifying        : perl-Socket-4:2.037-3.fc39.x86_64                  245/390 
  Verifying        : perl-Storable-1:3.32-500.fc39.x86_64               246/390 
  Verifying        : perl-Symbol-1.09-500.fc39.noarch                   247/390 
  Verifying        : perl-Term-ANSIColor-5.01-501.fc39.noarch           248/390 
  Verifying        : perl-Term-Cap-1.18-500.fc39.noarch                 249/390 
  Verifying        : perl-Text-ParseWords-3.31-500.fc39.noarch          250/390 
  Verifying        : perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch        251/390 
  Verifying        : perl-Time-Local-2:1.350-3.fc39.noarch              252/390 
  Verifying        : perl-URI-5.21-1.fc40.noarch                        253/390 
  Verifying        : perl-base-2.27-500.fc39.noarch                     254/390 
  Verifying        : perl-constant-1.33-501.fc39.noarch                 255/390 
  Verifying        : perl-if-0.61.000-500.fc39.noarch                   256/390 
  Verifying        : perl-interpreter-4:5.38.0-500.fc39.x86_64          257/390 
  Verifying        : perl-libnet-3.15-501.fc39.noarch                   258/390 
  Verifying        : perl-libs-4:5.38.0-500.fc39.x86_64                 259/390 
  Verifying        : perl-locale-1.10-500.fc39.noarch                   260/390 
  Verifying        : perl-mro-1.28-500.fc39.x86_64                      261/390 
  Verifying        : perl-overload-1.37-500.fc39.noarch                 262/390 
  Verifying        : perl-overloading-0.02-500.fc39.noarch              263/390 
  Verifying        : perl-parent-1:0.241-500.fc39.noarch                264/390 
  Verifying        : perl-podlators-1:5.01-500.fc39.noarch              265/390 
  Verifying        : perl-vars-1.05-500.fc39.noarch                     266/390 
  Verifying        : petsc-mpich-3.19.4-9.fc40.x86_64                   267/390 
  Verifying        : petsc-mpich-devel-3.19.4-9.fc40.x86_64             268/390 
  Verifying        : petsc-openmpi-3.19.4-9.fc40.x86_64                 269/390 
  Verifying        : petsc-openmpi-devel-3.19.4-9.fc40.x86_64           270/390 
  Verifying        : pixman-0.42.2-2.fc39.x86_64                        271/390 
  Verifying        : pmix-4.1.3-1.fc40.x86_64                           272/390 
  Verifying        : poppler-23.08.0-1.fc39.x86_64                      273/390 
  Verifying        : poppler-data-0.4.11-5.fc39.noarch                  274/390 
  Verifying        : poppler-glib-23.08.0-1.fc39.x86_64                 275/390 
  Verifying        : procps-ng-4.0.3-5.fc40.x86_64                      276/390 
  Verifying        : pyproject-rpm-macros-1.9.0-2.fc39.noarch           277/390 
  Verifying        : python-pip-wheel-23.2.1-1.fc39.noarch              278/390 
  Verifying        : python-rpm-macros-3.12-4.fc40.noarch               279/390 
  Verifying        : python3-3.12.0~rc2-1.fc40.x86_64                   280/390 
  Verifying        : python3-appdirs-1.4.4-11.fc39.noarch               281/390 
  Verifying        : python3-babel-2.12.1-4.fc39~bootstrap.noarch       282/390 
  Verifying        : python3-blosc2-2.2.5-3.fc39.x86_64                 283/390 
  Verifying        : python3-boutdata-0.1.10-4.fc39.noarch              284/390 
  Verifying        : python3-boututils-0.1.10-4.fc39.noarch             285/390 
  Verifying        : python3-brotli-1.1.0-1.fc40.x86_64                 286/390 
  Verifying        : python3-cairo-1.24.0-2.fc39.x86_64                 287/390 
  Verifying        : python3-certifi-2023.05.07-2.fc39.noarch           288/390 
  Verifying        : python3-cftime-1.6.2-1.fc39.x86_64                 289/390 
  Verifying        : python3-charset-normalizer-3.2.0-2.fc39.noarch     290/390 
  Verifying        : python3-contourpy-1.1.0-2.fc39.x86_64              291/390 
  Verifying        : python3-cpuinfo-9.0.0-5.fc39.noarch                292/390 
  Verifying        : python3-cycler-0.11.0-9.fc39.noarch                293/390 
  Verifying        : python3-cython-3.0.2-1.fc40.x86_64                 294/390 
  Verifying        : python3-dateutil-1:2.8.2-10.fc39.noarch            295/390 
  Verifying        : python3-devel-3.12.0~rc2-1.fc40.x86_64             296/390 
  Verifying        : python3-docutils-0.20.1-1.fc40.noarch              297/390 
  Verifying        : python3-fonttools-4.42.1-1.fc40.x86_64             298/390 
  Verifying        : python3-fs-2.4.16-5.fc39.noarch                    299/390 
  Verifying        : python3-idna-3.4-5.fc40.noarch                     300/390 
  Verifying        : python3-imagesize-1.4.1-5.fc40.noarch              301/390 
  Verifying        : python3-jinja2-3.1.2-6.fc40.noarch                 302/390 
  Verifying        : python3-kiwisolver-1.4.5-1.fc40.x86_64             303/390 
  Verifying        : python3-libs-3.12.0~rc2-1.fc40.x86_64              304/390 
  Verifying        : python3-lxml-4.9.3-2.fc39.x86_64                   305/390 
  Verifying        : python3-markupsafe-2.1.3-2.fc39.x86_64             306/390 
  Verifying        : python3-matplotlib-3.8.0-1.fc40.x86_64             307/390 
  Verifying        : python3-matplotlib-data-3.8.0-1.fc40.noarch        308/390 
  Verifying        : python3-matplotlib-data-fonts-3.8.0-1.fc40.noarc   309/390 
  Verifying        : python3-matplotlib-tk-3.8.0-1.fc40.x86_64          310/390 
  Verifying        : python3-mpmath-1.3.0-3.fc39.noarch                 311/390 
  Verifying        : python3-msgpack-1.0.5-3.fc39.x86_64                312/390 
  Verifying        : python3-natsort-7.1.1-10.fc39.noarch               313/390 
  Verifying        : python3-ndindex-1.7-9.fc39.x86_64                  314/390 
  Verifying        : python3-netcdf4-1.6.4-3.fc39.x86_64                315/390 
  Verifying        : python3-numexpr-2.8.5-2.fc40.x86_64                316/390 
  Verifying        : python3-numpy-1:1.24.4-2.fc39.x86_64               317/390 
  Verifying        : python3-numpy-f2py-1:1.24.4-2.fc39.x86_64          318/390 
  Verifying        : python3-olefile-0.46-21.fc39.noarch                319/390 
  Verifying        : python3-packaging-23.1-5.fc40.noarch               320/390 
  Verifying        : python3-pillow-10.0.1-1.fc40.x86_64                321/390 
  Verifying        : python3-pillow-tk-10.0.1-1.fc40.x86_64             322/390 
  Verifying        : python3-pooch-1.5.2-12.fc39.noarch                 323/390 
  Verifying        : python3-pygments-2.16.1-1.fc40.noarch              324/390 
  Verifying        : python3-pyparsing-3.0.9-11.fc39.noarch             325/390 
  Verifying        : python3-pysocks-1.7.1-20.fc39.noarch               326/390 
  Verifying        : python3-requests-2.28.2-6.fc40.noarch              327/390 
  Verifying        : python3-rpm-generators-14-7.fc39.noarch            328/390 
  Verifying        : python3-rpm-macros-3.12-4.fc40.noarch              329/390 
  Verifying        : python3-scipy-1.11.1-1.fc39.x86_64                 330/390 
  Verifying        : python3-setuptools-67.7.2-7.fc40.noarch            331/390 
  Verifying        : python3-six-1.16.0-12.fc39.noarch                  332/390 
  Verifying        : python3-snowballstemmer-2.2.0-7.fc39.noarch        333/390 
  Verifying        : python3-sphinx-1:7.1.2-1.fc40.noarch               334/390 
  Verifying        : python3-sphinx-theme-alabaster-0.7.12-19.fc39.no   335/390 
  Verifying        : python3-sphinxcontrib-applehelp-1.0.6-1.fc40.noa   336/390 
  Verifying        : python3-sphinxcontrib-devhelp-1.0.2-14.fc39.noar   337/390 
  Verifying        : python3-sphinxcontrib-htmlhelp-2.0.3-1.fc40.noar   338/390 
  Verifying        : python3-sphinxcontrib-jsmath-1.0.1-22.fc39.noarc   339/390 
  Verifying        : python3-sphinxcontrib-qthelp-1.0.3-15.fc39.noarc   340/390 
  Verifying        : python3-sphinxcontrib-serializinghtml-1.1.5-10.f   341/390 
  Verifying        : python3-sympy-1.12-2.fc39.x86_64                   342/390 
  Verifying        : python3-tables-3.8.0-6.fc40.x86_64                 343/390 
  Verifying        : python3-tkinter-3.12.0~rc2-1.fc40.x86_64           344/390 
  Verifying        : python3-urllib3+socks-1.26.16-3.fc40.noarch        345/390 
  Verifying        : python3-urllib3-1.26.16-3.fc40.noarch              346/390 
  Verifying        : rav1e-libs-0.6.6-2.fc39.x86_64                     347/390 
  Verifying        : rhash-1.4.3-3.fc39.x86_64                          348/390 
  Verifying        : rpm-mpi-hooks-8-6.fc39.noarch                      349/390 
  Verifying        : rsvg-pixbuf-loader-2.56.92-1.fc40.x86_64           350/390 
  Verifying        : scalapack-common-2.2.0-6.fc40.x86_64               351/390 
  Verifying        : scalapack-mpich-2.2.0-6.fc40.x86_64                352/390 
  Verifying        : scalapack-openmpi-2.2.0-6.fc40.x86_64              353/390 
  Verifying        : shared-mime-info-2.2-4.fc39.x86_64                 354/390 
  Verifying        : snappy-1.1.10-2.fc39.x86_64                        355/390 
  Verifying        : suitesparse-5.13.0-3.fc39.x86_64                   356/390 
  Verifying        : suitesparse64-5.13.0-3.fc39.x86_64                 357/390 
  Verifying        : sundials-6.5.1-5.fc40.x86_64                       358/390 
  Verifying        : sundials-devel-6.5.1-5.fc40.x86_64                 359/390 
  Verifying        : sundials-mpich-6.5.1-5.fc40.x86_64                 360/390 
  Verifying        : sundials-mpich-devel-6.5.1-5.fc40.x86_64           361/390 
  Verifying        : sundials-openmpi-6.5.1-5.fc40.x86_64               362/390 
  Verifying        : sundials-openmpi-devel-6.5.1-5.fc40.x86_64         363/390 
  Verifying        : superlu_dist-mpich-1:8.1.2-6.fc40.x86_64           364/390 
  Verifying        : superlu_dist-mpich-devel-1:8.1.2-6.fc40.x86_64     365/390 
  Verifying        : superlu_dist-openmpi-1:8.1.2-6.fc40.x86_64         366/390 
  Verifying        : superlu_dist-openmpi-devel-1:8.1.2-6.fc40.x86_64   367/390 
  Verifying        : svt-av1-libs-1.4.1-3.fc39.x86_64                   368/390 
  Verifying        : systemd-254.2-7.fc40.x86_64                        369/390 
  Verifying        : systemd-pam-254.2-7.fc40.x86_64                    370/390 
  Verifying        : systemd-rpm-macros-254.2-7.fc40.noarch             371/390 
  Verifying        : systemd-udev-254.2-7.fc40.x86_64                   372/390 
  Verifying        : tcsh-6.24.10-2.fc39.x86_64                         373/390 
  Verifying        : tk-1:8.6.13-1.fc40.x86_64                          374/390 
  Verifying        : ucx-1.14.1-4.fc39.x86_64                           375/390 
  Verifying        : urw-base35-bookman-fonts-20200910-18.fc39.noarch   376/390 
  Verifying        : urw-base35-c059-fonts-20200910-18.fc39.noarch      377/390 
  Verifying        : urw-base35-d050000l-fonts-20200910-18.fc39.noarc   378/390 
  Verifying        : urw-base35-fonts-20200910-18.fc39.noarch           379/390 
  Verifying        : urw-base35-fonts-common-20200910-18.fc39.noarch    380/390 
  Verifying        : urw-base35-gothic-fonts-20200910-18.fc39.noarch    381/390 
  Verifying        : urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39   382/390 
  Verifying        : urw-base35-nimbus-roman-fonts-20200910-18.fc39.n   383/390 
  Verifying        : urw-base35-nimbus-sans-fonts-20200910-18.fc39.no   384/390 
  Verifying        : urw-base35-p052-fonts-20200910-18.fc39.noarch      385/390 
  Verifying        : urw-base35-standard-symbols-ps-fonts-20200910-18   386/390 
  Verifying        : urw-base35-z003-fonts-20200910-18.fc39.noarch      387/390 
  Verifying        : vim-filesystem-2:9.0.1882-1.fc40.noarch            388/390 
  Verifying        : xml-common-0.6.3-61.fc39.noarch                    389/390 
  Verifying        : yaksa-0.2-3.fc37.x86_64                            390/390 

Installed:
  MUMPS-common-5.5.1-6.fc40.noarch                                              
  MUMPS-mpich-5.5.1-6.fc40.x86_64                                               
  MUMPS-openmpi-5.5.1-6.fc40.x86_64                                             
  SuperLUMT-common-3.1.0-36.fc39.noarch                                         
  SuperLUMT64-double-3.1.0-36.fc39.x86_64                                       
  abattis-cantarell-vf-fonts-0.301-10.fc39.noarch                               
  adobe-mappings-cmap-20230622-1.fc39.noarch                                    
  adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch                         
  adobe-mappings-pdf-20190401-5.fc39.noarch                                     
  annobin-docs-12.26-1.fc40.noarch                                              
  annobin-plugin-gcc-12.26-1.fc40.x86_64                                        
  avahi-libs-0.8-24.fc39.x86_64                                                 
  blosc-1.21.4-2.fc40.x86_64                                                    
  blosc2-2.10.0-2.fc40.x86_64                                                   
  cairo-1.17.8-5.fc40.x86_64                                                    
  cairo-gobject-1.17.8-5.fc40.x86_64                                            
  chrpath-0.16-21.fc39.x86_64                                                   
  clang-libs-17.0.0~rc4-1.fc40.x86_64                                           
  clang-resource-filesystem-17.0.0~rc4-1.fc40.x86_64                            
  cmake-3.27.4-8.fc40.x86_64                                                    
  cmake-data-3.27.4-8.fc40.noarch                                               
  cmake-filesystem-3.27.4-8.fc40.x86_64                                         
  cmake-rpm-macros-3.27.4-8.fc40.noarch                                         
  cpp-13.2.1-1.fc40.x86_64                                                      
  crypto-policies-scripts-20230731-1.git5ed06e0.fc39.noarch                     
  cryptsetup-libs-2.6.1-3.fc39.x86_64                                           
  cups-libs-1:2.4.6-6.fc40.x86_64                                               
  dbus-1:1.14.10-1.fc40.x86_64                                                  
  dbus-broker-33-2.fc39.x86_64                                                  
  dbus-common-1:1.14.10-1.fc40.noarch                                           
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  default-fonts-core-sans-4.0-9.fc40.noarch                                     
  dejavu-sans-fonts-2.37-20.fc38.noarch                                         
  device-mapper-1.02.196-1.fc39.x86_64                                          
  device-mapper-libs-1.02.196-1.fc39.x86_64                                     
  doxygen-2:1.9.8-1.fc40.x86_64                                                 
  emacs-filesystem-1:29.1-1.fc40.noarch                                         
  environment-modules-5.3.1-2.fc39.x86_64                                       
  expat-2.5.0-3.fc39.x86_64                                                     
  fftw-3.3.10-7.fc39.x86_64                                                     
  fftw-devel-3.3.10-7.fc39.x86_64                                               
  fftw-libs-3.3.10-7.fc39.x86_64                                                
  fftw-libs-double-3.3.10-7.fc39.x86_64                                         
  fftw-libs-long-3.3.10-7.fc39.x86_64                                           
  fftw-libs-quad-3.3.10-7.fc39.x86_64                                           
  fftw-libs-single-3.3.10-7.fc39.x86_64                                         
  flexiblas-3.3.1-5.fc39.x86_64                                                 
  flexiblas-devel-3.3.1-5.fc39.x86_64                                           
  flexiblas-netlib-3.3.1-5.fc39.x86_64                                          
  flexiblas-netlib64-3.3.1-5.fc39.x86_64                                        
  flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64                                 
  flexiblas-openblas-openmp64-3.3.1-5.fc39.x86_64                               
  fmt-10.0.0-3.fc39.x86_64                                                      
  fmt-devel-10.0.0-3.fc39.x86_64                                                
  fontconfig-2.14.2-5.fc40.x86_64                                               
  fonts-filesystem-1:2.0.5-12.fc39.noarch                                       
  freetype-2.13.1-2.fc40.x86_64                                                 
  fribidi-1.0.13-2.fc39.x86_64                                                  
  gc-8.2.2-4.fc39.x86_64                                                        
  gcc-13.2.1-1.fc40.x86_64                                                      
  gcc-c++-13.2.1-1.fc40.x86_64                                                  
  gcc-gfortran-13.2.1-1.fc40.x86_64                                             
  gcc-plugin-annobin-13.2.1-1.fc40.x86_64                                       
  gd-2.3.3-12.fc40.x86_64                                                       
  gdk-pixbuf2-2.42.10-5.fc39.x86_64                                             
  gettext-0.22-2.fc39.x86_64                                                    
  gettext-common-devel-0.22-2.fc39.noarch                                       
  gettext-devel-0.22-2.fc39.x86_64                                              
  gettext-envsubst-0.22-2.fc39.x86_64                                           
  gettext-libs-0.22-2.fc39.x86_64                                               
  gettext-runtime-0.22-2.fc39.x86_64                                            
  glib2-2.78.0-2.fc40.x86_64                                                    
  glibc-devel-2.38.9000-9.fc40.x86_64                                           
  glibc-headers-x86-2.38.9000-9.fc40.noarch                                     
  gnutls-3.8.1-1.fc40.x86_64                                                    
  google-droid-sans-fonts-20200215-17.fc40.noarch                               
  google-noto-fonts-common-20230801-3.fc40.noarch                               
  google-noto-sans-vf-fonts-20230801-3.fc40.noarch                              
  graphite2-1.3.14-12.fc39.x86_64                                               
  graphviz-8.1.0-6.fc40.x86_64                                                  
  groff-base-1.23.0-2.fc39.x86_64                                               
  gts-0.7.6-46.20121130.fc39.x86_64                                             
  guile22-2.2.7-9.fc39.x86_64                                                   
  harfbuzz-8.2.0-1.fc40.x86_64                                                  
  hdf-libs-4.2.15-14.fc40.x86_64                                                
  hdf5-1.12.1-12.fc39.x86_64                                                    
  hdf5-devel-1.12.1-12.fc39.x86_64                                              
  hdf5-mpich-1.12.1-12.fc39.x86_64                                              
  hdf5-mpich-devel-1.12.1-12.fc39.x86_64                                        
  hdf5-openmpi-1.12.1-12.fc39.x86_64                                            
  hdf5-openmpi-devel-1.12.1-12.fc39.x86_64                                      
  highway-1.0.7-1.fc40.x86_64                                                   
  hwloc-libs-2.9.0-7.fc39.x86_64                                                
  hypre-mpich-2.24.0-8.fc40.x86_64                                              
  hypre-openmpi-2.24.0-8.fc40.x86_64                                            
  infinipath-psm-3.3-26_g604758e_open.6.fc37.6.x86_64                           
  jbig2dec-libs-0.19-10.fc39.x86_64                                             
  jbigkit-libs-2.1-26.fc39.x86_64                                               
  json-c-0.17-1.fc40.x86_64                                                     
  jsoncpp-1.9.5-5.fc39.x86_64                                                   
  kbd-2.6.2-1.fc40.x86_64                                                       
  kbd-legacy-2.6.2-1.fc40.noarch                                                
  kbd-misc-2.6.2-1.fc40.noarch                                                  
  kernel-headers-6.6.0-0.rc2.git0.1.fc40.x86_64                                 
  kmod-30-6.fc40.x86_64                                                         
  kmod-libs-30-6.fc40.x86_64                                                    
  lasi-1.1.3-11.fc39.x86_64                                                     
  lcms2-2.15-2.fc40.x86_64                                                      
  less-643-1.fc40.x86_64                                                        
  libICE-1.0.10-12.fc40.x86_64                                                  
  libSM-1.2.3-14.fc40.x86_64                                                    
  libX11-1.8.6-3.fc40.x86_64                                                    
  libX11-common-1.8.6-3.fc40.noarch                                             
  libXau-1.0.11-4.fc40.x86_64                                                   
  libXext-1.3.5-3.fc39.x86_64                                                   
  libXft-2.3.8-4.fc40.x86_64                                                    
  libXpm-3.5.15-5.fc40.x86_64                                                   
  libXrender-0.9.11-4.fc40.x86_64                                               
  libXt-1.2.1-6.fc40.x86_64                                                     
  libaec-1.0.6-5.fc39.x86_64                                                    
  libaec-devel-1.0.6-5.fc39.x86_64                                              
  libaom-3.7.0-1.fc40.x86_64                                                    
  libargon2-20190702-3.fc39.x86_64                                              
  libavif-0.11.1-11.fc40.x86_64                                                 
  libb2-0.98.1-9.fc39.x86_64                                                    
  libcbor-0.10.2-2.fc39.x86_64                                                  
  libcurl-devel-8.3.0-1.fc40.x86_64                                             
  libdatrie-0.2.13-7.fc39.x86_64                                                
  libdav1d-1.2.1-2.fc39.x86_64                                                  
  libedit-3.1-48.20230828cvs.fc40.x86_64                                        
  libfabric-1.19.0-1.fc40.x86_64                                                
  libfido2-1.13.0-3.fc40.x86_64                                                 
  libgfortran-13.2.1-1.fc40.x86_64                                              
  libgs-10.01.2-3.fc40.x86_64                                                   
  libibumad-46.0-4.fc39.x86_64                                                  
  libibverbs-46.0-4.fc39.x86_64                                                 
  libijs-0.35-19.fc39.x86_64                                                    
  libimagequant-4.0.1-5.fc39.x86_64                                             
  libjpeg-turbo-2.1.4-3.fc39.x86_64                                             
  libjxl-1:0.8.2-3.fc40.x86_64                                                  
  liblerc-4.0.0-4.fc39.x86_64                                                   
  libmpc-1.3.1-3.fc39.x86_64                                                    
  libnl3-3.8.0-1.fc40.x86_64                                                    
  libpaper-1:2.1.1-1.fc39.x86_64                                                
  libpipeline-1.5.7-3.fc39.x86_64                                               
  libpng-2:1.6.37-15.fc39.x86_64                                                
  libpsm2-11.2.230-2.fc39.x86_64                                                
  libqhull_r-1:8.0.2-2.fc40.x86_64                                              
  libquadmath-13.2.1-1.fc40.x86_64                                              
  libquadmath-devel-13.2.1-1.fc40.x86_64                                        
  libraqm-0.8.0-5.fc39.x86_64                                                   
  librdmacm-46.0-4.fc39.x86_64                                                  
  librsvg2-2.56.92-1.fc40.x86_64                                                
  libseccomp-2.5.3-6.fc39.x86_64                                                
  libstdc++-devel-13.2.1-1.fc40.x86_64                                          
  libthai-0.1.29-6.fc39.x86_64                                                  
  libtiff-4.4.0-8.fc40.x86_64                                                   
  libtool-ltdl-2.4.7-8.fc40.x86_64                                              
  libuv-1:1.46.0-2.fc39.x86_64                                                  
  libvmaf-2.3.0-6.fc39.x86_64                                                   
  libwebp-1.3.2-1.fc40.x86_64                                                   
  libxcb-1.13.1-12.fc39.x86_64                                                  
  libxcrypt-devel-4.4.36-2.fc39.x86_64                                          
  libxslt-1.1.38-3.fc39.x86_64                                                  
  llvm-libs-17.0.0~rc4-1.fc40.x86_64                                            
  lzo-2.10-9.fc40.x86_64                                                        
  m4-1.4.19-7.fc40.x86_64                                                       
  make-1:4.4.1-2.fc39.x86_64                                                    
  man-db-2.11.2-5.fc40.x86_64                                                   
  metis-5.1.0.3-2.fc39.x86_64                                                   
  mpark-variant-devel-1.4.0-10.fc39.x86_64                                      
  mpdecimal-2.5.1-7.fc39.x86_64                                                 
  mpich-4.1.2-5.fc40.x86_64                                                     
  mpich-devel-4.1.2-5.fc40.x86_64                                               
  munge-libs-0.5.15-5.fc40.x86_64                                               
  ncurses-6.4-7.20230520.fc40.x86_64                                            
  netcdf-4.9.0-5.fc38.x86_64                                                    
  netcdf-cxx4-4.3.1-9.fc39.x86_64                                               
  netcdf-cxx4-devel-4.3.1-9.fc39.x86_64                                         
  netcdf-devel-4.9.0-5.fc38.x86_64                                              
  netpbm-11.02.00-2.fc39.x86_64                                                 
  nettle-3.9.1-2.fc39.x86_64                                                    
  nspr-4.35.0-13.fc40.x86_64                                                    
  nss-3.93.0-2.fc40.x86_64                                                      
  nss-softokn-3.93.0-2.fc40.x86_64                                              
  nss-softokn-freebl-3.93.0-2.fc40.x86_64                                       
  nss-sysinit-3.93.0-2.fc40.x86_64                                              
  nss-util-3.93.0-2.fc40.x86_64                                                 
  numactl-libs-2.0.16-3.fc39.x86_64                                             
  openblas-0.3.21-6.fc39.x86_64                                                 
  openblas-openmp-0.3.21-6.fc39.x86_64                                          
  openblas-openmp64-0.3.21-6.fc39.x86_64                                        
  openjpeg2-2.5.0-4.fc39.x86_64                                                 
  openmpi-4.1.5-5.fc40.x86_64                                                   
  openmpi-devel-4.1.5-5.fc40.x86_64                                             
  opensm-libs-3.3.24-6.fc39.x86_64                                              
  openssh-9.3p1-10.fc40.x86_64                                                  
  openssh-clients-9.3p1-10.fc40.x86_64                                          
  orangefs-2.9.8-9.fc39.x86_64                                                  
  pango-1.51.0-1.fc40.x86_64                                                    
  perl-AutoLoader-5.74-500.fc39.noarch                                          
  perl-B-1.88-500.fc39.x86_64                                                   
  perl-Carp-1.54-500.fc39.noarch                                                
  perl-Class-Struct-0.68-500.fc39.noarch                                        
  perl-Data-Dumper-2.188-501.fc39.x86_64                                        
  perl-Digest-1.20-500.fc39.noarch                                              
  perl-Digest-MD5-2.58-500.fc39.x86_64                                          
  perl-DynaLoader-1.54-500.fc39.x86_64                                          
  perl-Encode-4:3.19-500.fc39.x86_64                                            
  perl-Errno-1.37-500.fc39.x86_64                                               
  perl-Exporter-5.77-500.fc39.noarch                                            
  perl-Fcntl-1.15-500.fc39.x86_64                                               
  perl-File-Basename-2.86-500.fc39.noarch                                       
  perl-File-Path-2.18-500.fc39.noarch                                           
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  perl-File-stat-1.13-500.fc39.noarch                                           
  perl-FileHandle-2.05-500.fc39.noarch                                          
  perl-Getopt-Long-1:2.54-500.fc39.noarch                                       
  perl-Getopt-Std-1.13-500.fc39.noarch                                          
  perl-HTTP-Tiny-0.088-3.fc39.noarch                                            
  perl-IO-1.52-500.fc39.x86_64                                                  
  perl-IO-Socket-IP-0.42-1.fc39.noarch                                          
  perl-IO-Socket-SSL-2.083-3.fc39.noarch                                        
  perl-IPC-Open3-1.22-500.fc39.noarch                                           
  perl-MIME-Base64-3.16-500.fc39.x86_64                                         
  perl-Mozilla-CA-20230821-1.fc40.noarch                                        
  perl-Net-SSLeay-1.92-10.fc39.x86_64                                           
  perl-POSIX-2.13-500.fc39.x86_64                                               
  perl-PathTools-3.89-500.fc39.x86_64                                           
  perl-Pod-Escapes-1:1.07-501.fc40.noarch                                       
  perl-Pod-Perldoc-3.28.01-501.fc39.noarch                                      
  perl-Pod-Simple-1:3.45-4.fc39.noarch                                          
  perl-Pod-Usage-4:2.03-500.fc39.noarch                                         
  perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64                                 
  perl-SelectSaver-1.02-500.fc39.noarch                                         
  perl-Socket-4:2.037-3.fc39.x86_64                                             
  perl-Storable-1:3.32-500.fc39.x86_64                                          
  perl-Symbol-1.09-500.fc39.noarch                                              
  perl-Term-ANSIColor-5.01-501.fc39.noarch                                      
  perl-Term-Cap-1.18-500.fc39.noarch                                            
  perl-Text-ParseWords-3.31-500.fc39.noarch                                     
  perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch                                   
  perl-Time-Local-2:1.350-3.fc39.noarch                                         
  perl-URI-5.21-1.fc40.noarch                                                   
  perl-base-2.27-500.fc39.noarch                                                
  perl-constant-1.33-501.fc39.noarch                                            
  perl-if-0.61.000-500.fc39.noarch                                              
  perl-interpreter-4:5.38.0-500.fc39.x86_64                                     
  perl-libnet-3.15-501.fc39.noarch                                              
  perl-libs-4:5.38.0-500.fc39.x86_64                                            
  perl-locale-1.10-500.fc39.noarch                                              
  perl-mro-1.28-500.fc39.x86_64                                                 
  perl-overload-1.37-500.fc39.noarch                                            
  perl-overloading-0.02-500.fc39.noarch                                         
  perl-parent-1:0.241-500.fc39.noarch                                           
  perl-podlators-1:5.01-500.fc39.noarch                                         
  perl-vars-1.05-500.fc39.noarch                                                
  petsc-mpich-3.19.4-9.fc40.x86_64                                              
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  petsc-openmpi-3.19.4-9.fc40.x86_64                                            
  petsc-openmpi-devel-3.19.4-9.fc40.x86_64                                      
  pixman-0.42.2-2.fc39.x86_64                                                   
  pmix-4.1.3-1.fc40.x86_64                                                      
  poppler-23.08.0-1.fc39.x86_64                                                 
  poppler-data-0.4.11-5.fc39.noarch                                             
  poppler-glib-23.08.0-1.fc39.x86_64                                            
  procps-ng-4.0.3-5.fc40.x86_64                                                 
  ptscotch-mpich-7.0.4-1.fc40.x86_64                                            
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  ptscotch-mpich-devel-parmetis-7.0.4-1.fc40.x86_64                             
  ptscotch-openmpi-7.0.4-1.fc40.x86_64                                          
  ptscotch-openmpi-devel-7.0.4-1.fc40.x86_64                                    
  pyproject-rpm-macros-1.9.0-2.fc39.noarch                                      
  python-pip-wheel-23.2.1-1.fc39.noarch                                         
  python-rpm-macros-3.12-4.fc40.noarch                                          
  python3-3.12.0~rc2-1.fc40.x86_64                                              
  python3-appdirs-1.4.4-11.fc39.noarch                                          
  python3-babel-2.12.1-4.fc39~bootstrap.noarch                                  
  python3-blosc2-2.2.5-3.fc39.x86_64                                            
  python3-boutdata-0.1.10-4.fc39.noarch                                         
  python3-boututils-0.1.10-4.fc39.noarch                                        
  python3-brotli-1.1.0-1.fc40.x86_64                                            
  python3-cairo-1.24.0-2.fc39.x86_64                                            
  python3-certifi-2023.05.07-2.fc39.noarch                                      
  python3-cftime-1.6.2-1.fc39.x86_64                                            
  python3-charset-normalizer-3.2.0-2.fc39.noarch                                
  python3-contourpy-1.1.0-2.fc39.x86_64                                         
  python3-cpuinfo-9.0.0-5.fc39.noarch                                           
  python3-cycler-0.11.0-9.fc39.noarch                                           
  python3-cython-3.0.2-1.fc40.x86_64                                            
  python3-dateutil-1:2.8.2-10.fc39.noarch                                       
  python3-devel-3.12.0~rc2-1.fc40.x86_64                                        
  python3-docutils-0.20.1-1.fc40.noarch                                         
  python3-fonttools-4.42.1-1.fc40.x86_64                                        
  python3-fs-2.4.16-5.fc39.noarch                                               
  python3-idna-3.4-5.fc40.noarch                                                
  python3-imagesize-1.4.1-5.fc40.noarch                                         
  python3-jinja2-3.1.2-6.fc40.noarch                                            
  python3-kiwisolver-1.4.5-1.fc40.x86_64                                        
  python3-libs-3.12.0~rc2-1.fc40.x86_64                                         
  python3-lxml-4.9.3-2.fc39.x86_64                                              
  python3-markupsafe-2.1.3-2.fc39.x86_64                                        
  python3-matplotlib-3.8.0-1.fc40.x86_64                                        
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  python3-matplotlib-tk-3.8.0-1.fc40.x86_64                                     
  python3-mpmath-1.3.0-3.fc39.noarch                                            
  python3-msgpack-1.0.5-3.fc39.x86_64                                           
  python3-natsort-7.1.1-10.fc39.noarch                                          
  python3-ndindex-1.7-9.fc39.x86_64                                             
  python3-netcdf4-1.6.4-3.fc39.x86_64                                           
  python3-numexpr-2.8.5-2.fc40.x86_64                                           
  python3-numpy-1:1.24.4-2.fc39.x86_64                                          
  python3-numpy-f2py-1:1.24.4-2.fc39.x86_64                                     
  python3-olefile-0.46-21.fc39.noarch                                           
  python3-packaging-23.1-5.fc40.noarch                                          
  python3-pillow-10.0.1-1.fc40.x86_64                                           
  python3-pillow-tk-10.0.1-1.fc40.x86_64                                        
  python3-pooch-1.5.2-12.fc39.noarch                                            
  python3-pygments-2.16.1-1.fc40.noarch                                         
  python3-pyparsing-3.0.9-11.fc39.noarch                                        
  python3-pysocks-1.7.1-20.fc39.noarch                                          
  python3-requests-2.28.2-6.fc40.noarch                                         
  python3-rpm-generators-14-7.fc39.noarch                                       
  python3-rpm-macros-3.12-4.fc40.noarch                                         
  python3-scipy-1.11.1-1.fc39.x86_64                                            
  python3-setuptools-67.7.2-7.fc40.noarch                                       
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-snowballstemmer-2.2.0-7.fc39.noarch                                   
  python3-sphinx-1:7.1.2-1.fc40.noarch                                          
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  python3-sympy-1.12-2.fc39.x86_64                                              
  python3-tables-3.8.0-6.fc40.x86_64                                            
  python3-tkinter-3.12.0~rc2-1.fc40.x86_64                                      
  python3-urllib3-1.26.16-3.fc40.noarch                                         
  python3-urllib3+socks-1.26.16-3.fc40.noarch                                   
  rav1e-libs-0.6.6-2.fc39.x86_64                                                
  rhash-1.4.3-3.fc39.x86_64                                                     
  rpm-mpi-hooks-8-6.fc39.noarch                                                 
  rsvg-pixbuf-loader-2.56.92-1.fc40.x86_64                                      
  scalapack-common-2.2.0-6.fc40.x86_64                                          
  scalapack-mpich-2.2.0-6.fc40.x86_64                                           
  scalapack-openmpi-2.2.0-6.fc40.x86_64                                         
  shared-mime-info-2.2-4.fc39.x86_64                                            
  snappy-1.1.10-2.fc39.x86_64                                                   
  suitesparse-5.13.0-3.fc39.x86_64                                              
  suitesparse64-5.13.0-3.fc39.x86_64                                            
  sundials-6.5.1-5.fc40.x86_64                                                  
  sundials-devel-6.5.1-5.fc40.x86_64                                            
  sundials-mpich-6.5.1-5.fc40.x86_64                                            
  sundials-mpich-devel-6.5.1-5.fc40.x86_64                                      
  sundials-openmpi-6.5.1-5.fc40.x86_64                                          
  sundials-openmpi-devel-6.5.1-5.fc40.x86_64                                    
  superlu_dist-mpich-1:8.1.2-6.fc40.x86_64                                      
  superlu_dist-mpich-devel-1:8.1.2-6.fc40.x86_64                                
  superlu_dist-openmpi-1:8.1.2-6.fc40.x86_64                                    
  superlu_dist-openmpi-devel-1:8.1.2-6.fc40.x86_64                              
  svt-av1-libs-1.4.1-3.fc39.x86_64                                              
  systemd-254.2-7.fc40.x86_64                                                   
  systemd-pam-254.2-7.fc40.x86_64                                               
  systemd-rpm-macros-254.2-7.fc40.noarch                                        
  systemd-udev-254.2-7.fc40.x86_64                                              
  tcl-1:8.6.13-1.fc40.x86_64                                                    
  tcsh-6.24.10-2.fc39.x86_64                                                    
  tk-1:8.6.13-1.fc40.x86_64                                                     
  ucx-1.14.1-4.fc39.x86_64                                                      
  urw-base35-bookman-fonts-20200910-18.fc39.noarch                              
  urw-base35-c059-fonts-20200910-18.fc39.noarch                                 
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  urw-base35-fonts-20200910-18.fc39.noarch                                      
  urw-base35-fonts-common-20200910-18.fc39.noarch                               
  urw-base35-gothic-fonts-20200910-18.fc39.noarch                               
  urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch                       
  urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch                         
  urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch                          
  urw-base35-p052-fonts-20200910-18.fc39.noarch                                 
  urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch                  
  urw-base35-z003-fonts-20200910-18.fc39.noarch                                 
  vim-filesystem-2:9.0.1882-1.fc40.noarch                                       
  xapian-core-libs-1.4.23-1.fc40.x86_64                                         
  xml-common-0.6.3-61.fc39.noarch                                               
  yaksa-0.2-3.fc37.x86_64                                                       
  zlib-ng-2.1.3-4.fc40.x86_64                                                   
  zlib-ng-compat-devel-2.1.3-4.fc40.x86_64                                      

Complete!
Finish: build setup for bout++-5.0.0-10.fc40.src.rpm
Start: rpmbuild bout++-5.0.0-10.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1691971200
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.tTXyvs
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BOUT++-v5.0.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2659.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2661.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2664.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2678.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/petsc_318_compat.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/2693.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/fmt10.patch
+ /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f
+ sed -e 's/html_theme = "sphinx_book_theme"/html_theme = "sphinxdoc"/' -i manual/sphinx/conf.py
+ rm -rf externalpackages/mpark.variant/
+ mkdir -p externalpackages/mpark.variant/include/
+ rm -rf tools/pylib/boutdata
+ rm -rf tools/pylib/boututils
++ find -L tools/pylib/ -type f
++ grep -v _boutcore_build
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/rms.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_inp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/read_cxx.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_present.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_nonlinear.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_draw.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/pb_corral.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/grate2.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/basic_info.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/__init__.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/post_bout/ListDict.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.in
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/boutconfig/__init__.py.cin
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/scan_enums.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum_inv.pyx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/resolve_enum.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/other_enums.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.h.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/helper.cxx.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/geninput.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/generate.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_setup.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/debug_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp_openmpi_compat.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutpp.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.hxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutexception_helper.cxx
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/boutcpp.pxd.jinja
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/bout_options.pxd
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/backend.py
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/GENERATION.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/CMakeLists.txt
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/_boutpp_build/.gitignore
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/README.md
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/Makefile
+ for f in $(find -L tools/pylib/ -type f | grep -v _boutcore_build)
+ sed -i '/^#!\//d' tools/pylib/.gitignore
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.vc6QxU
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ export CC=mpicc
+ CC=mpicc
+ export CXX=mpicxx
+ CXX=mpicxx
+ for mpi in mpich openmpi
+ mkdir build_mpich
+ for mpi in mpich openmpi
+ mkdir build_openmpi
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/mpich-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/mpich -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- The CXX compiler identification is GNU 13.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/mpich/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring BOUT++ version 5.0.0
-- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ModuleNotFoundError: No module named 'zoidberg'
CMake Warning (dev) at CMakeLists.txt:373 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed 
-- Found Numpy: /usr/include (found version "1.24.4") 
-- Found Cython: TRUE (found version "3.0.2") 
-- Found Bash: /usr/bin/bash (found version "5.2.15") 
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/mpich/bin/mpicxx (found version "4.0") 
-- Found MPI: TRUE (found version "4.0")  
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") 
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/mpich-x86_64/petsc  
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") 
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") 
-- NetCDF support: ON
-- Found FFTW: /usr/lib64/libfftw3.so  
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl  
-- LAPACK support: ON
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22") 
-- Found Intl: built in to C library  
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 13.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/mpich/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot 
-- Found Sphinx: /usr/bin/sphinx-build  

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   FFTW support             : ON
   LAPACK support           : ON
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 2D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich` to compile BOUT++ ***

-- Configuring done (4.8s)
-- Generating done (0.3s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
+ /usr/bin/cmake --build build_mpich -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=]
  178 | #define CVM             "CVodeMalloc-- "
      |                         ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                   ^~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’
  496 |     fprintf(fp, MSG_BAD_N, N);
      |                 ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                          ~~^
      |                            |
      |                            long int
      |                          %d
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  189 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[  0%] Linking CXX shared library ../../lib/libpvpre.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o 
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  0%] Built target pvpre
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  0%] Generating locale/es/libbout.gmo, _mo_file_es
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po
[  2%] Generating locale/de/libbout.gmo, _mo_file_de
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po
[  2%] Generating locale/fr/libbout.gmo, _mo_file_fr
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po
[  2%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp
[  2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po
[  5%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/locale/zh_TW/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_TW/libbout.po
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[  5%] Built target mofiles
[  5%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/lib64/mpich/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[ 11%] Linking CXX shared library ../../lib/libpvode.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 11%] Built target pvode
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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/usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field2d.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field3d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field3d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field3d.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field_data.cxx.o -MF CMakeFiles/bout++.dir/src/field/field_data.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field_data.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field_data.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgroup.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldperp.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -MF CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/generated_fieldops.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/globalfield.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -MF CMakeFiles/bout++.dir/src/field/globalfield.cxx.o.d -o CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/globalfield.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -MF CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o.d -o CMakeFiles/bout++.dir/src/field/initialprofiles.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/initialprofiles.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/vecops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/vecops.cxx.o -MF CMakeFiles/bout++.dir/src/field/vecops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/vecops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/vecops.cxx
[ 23%] Building CXX object CMakeFiles/bout++.dir/src/field/vector2d.cxx.o
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx
[ 35%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx
[ 35%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/invert_laplace.cxx.o
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[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy/laplacexy.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp]
   41 | #warning LaplaceXY requires Hypre. No LaplaceXY available
      |  ^~~~~~~
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/laplacexz.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/impls/cyclic/cyclic.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromfile.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized]
  517 |     mesh->wait(xout);
      |     ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here
  488 |   comm_handle xin, xout;
      |                    ^~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx
In file included from /usr/include/c++/13/bits/shared_ptr.h:53,
                 from /usr/include/c++/13/memory:80,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36:
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/bilinear_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_z.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/interpolation_z.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/lagrange_4pt_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/fci.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/identity.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/shiftedmetric.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel/shiftedmetricinterp.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel_boundary_op.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel_boundary_region.cxx
[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/surfaceiter.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -MF CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/gyro_average.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -MF CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/physicsmodel.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -MF CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/smoothing.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/snb.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/snb.cxx.o -MF CMakeFiles/bout++.dir/src/physics/snb.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/snb.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/sourcex.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/adams_bashforth/adams_bashforth.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  378 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49:
/usr/include/mpich-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations]
  416 |         if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:49:5: note: declared here
   49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  428 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations]
  442 |       if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:53:5: note: declared here
   53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup,
      |     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations]
  533 |     CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:64:5: note: declared here
   64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations]
  535 |     CVSpilsGetNumLinIters(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/cvode/cvode_spils.h:67:5: note: declared here
   67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters);
      |     ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  679 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  681 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations]
  199 |   if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45:
/usr/include/mpich-x86_64/ida/ida_spils.h:44:5: note: declared here
   44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations]
  234 |       if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) {
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/mpich-x86_64/ida/ida_spils.h:47:5: note: declared here
   47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  264 |   ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~    
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  265 |                              PETSC_NULL);
      |             ^                ~~~~~~~~~~~~                                             
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  276 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  287 |     ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  290 |     ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  402 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  454 |     ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  456 |     ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  461 |     ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  463 |     ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  466 |     ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  473 |       ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~     
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  527 |   ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  879 |   ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  893 |   ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  916 |   ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
[ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx
[ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/pvode/pvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/pvode/pvode.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/rkscheme.cxx
[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/slepc/slepc.cxx
[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/split-rk/split-rk.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:567:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  567 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:569:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  569 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/solver.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/solver.cxx.o -MF CMakeFiles/bout++.dir/src/solver/solver.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/solver.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/bout_types.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx
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/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/derivs.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/generator_context.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx
In file included from /usr/include/mpich-x86_64/ncFile.h:2,
                 from /usr/include/mpich-x86_64/netcdf:16,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14:
/usr/include/mpich-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -MF CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/optionsreader.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/output.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/output.cxx.o -MF CMakeFiles/bout++.dir/src/sys/output.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/output.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/output.cxx
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
/usr/lib64/mpich/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx:29:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
   29 |       PetscInitialize(pargc, pargv, PETSC_NULL, help);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/range.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/timer.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/type_name.cxx.o
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[ 91%] Building CXX object CMakeFiles/bout++.dir/src/sys/utils.cxx.o
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[ 94%] Building CXX object CMakeFiles/bout++.dir/bout++-time.cxx.o
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CMakeFiles/bout++.dir/src/invert/laplace/impls/multigrid/multigrid_solver.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/naulin/naulin_laplace.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/pcr/pcr.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/pcr_thomas/pcr_thomas.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/petsc/petsc_laplace.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/petsc3damg/petsc3damg.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/serial_band/serial_band.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/serial_tri/serial_tri.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o CMakeFiles/bout++.dir/src/invert/laplace/invert_laplace.cxx.o CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o 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CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetricinterp.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_op.cxx.o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o CMakeFiles/bout++.dir/src/physics/physicsmodel.cxx.o 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CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib: /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/libfmt.so.10.0.0 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   68 |   alldata = new SPT_data[ye - ys + 1];
      |                                     ^
/usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
  128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.0.0 lib/libbout++.so.5.0.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 94%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 97%] Generating resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
[ 97%] Generating boutcpp.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutcpp.pxd
[ 97%] Generating boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
[100%] Generating helper.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx
[100%] Generating helper.h
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.h
[100%] Cythonizing python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported
warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/helper.cxx
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp
In file included from /usr/include/numpy/ndarraytypes.h:1940,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:1195:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/boutexception_helper.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:40870:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
40870 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:9213:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9213 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:8856:12: note: ‘__pyx_r’ was declared here
 8856 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:63928:42:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:64022:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
64022 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpp:10724:18: note: ‘__pyx_r’ was declared here
10724 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[100%] Linking CXX shared library libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E cmake_link_script CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-x86_64-linux-gnu.so -o libboutpp.cpython-312-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target boutpp.cpython-312-x86_64-linux-gnu
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/DependInfo.cmake "--color="
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/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Building python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-x86_64-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target boutpp
gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0

+ /usr/bin/cmake --build build_mpich/manual -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual//CMakeFiles/progress.marks
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/gmake  -f CMakeFiles/Makefile2 manual/all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/gmake  -f manual/CMakeFiles/sphinx-html.dir/build.make manual/CMakeFiles/sphinx-html.dir/depend
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/CMakeFiles/sphinx-html.dir/DependInfo.cmake "--color="
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[100%] Generating HTML documentation with Sphinx in /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs
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Running Sphinx v7.1.2
WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English).
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making output directory... done
building [mo]: targets for 0 po files that are out of date
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updating environment: [new config] 46 added, 0 changed, 0 removed
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/usr/lib/python3.12/site-packages/boutdata/collect.py:docstring of boutdata.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
WARNING: autodoc: failed to import module 'mayavi2' from module 'boutdata'; the following exception was raised:
No module named 'enthought'
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:5: ERROR: Unexpected indentation.
/usr/lib/python3.12/site-packages/boutdata/restart.py:docstring of boutdata.restart.shift_v3_to_v4:6: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'boutpp'; the following exception was raised:
No module named 'boutpp'
WARNING: autodoc: failed to import module 'analyse_equil_2' from module 'boututils'; the following exception was raised:
No module named 'crosslines'
WARNING: autodoc: failed to import module 'anim' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
WARNING: autodoc: failed to import module 'boutgrid' from module 'boututils'; the following exception was raised:
No module named 'tvtk'
/usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
WARNING: autodoc: failed to import module 'crosslines' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'efit_analyzer' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'fft_deriv' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'int_func' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'mode_structure' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'moment_xyzt' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'radial_grid' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'surface_average' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'volume_integral' from module 'boututils'; the following exception was raised:
No module named 'past'
WARNING: autodoc: failed to import module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'boundary' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'field' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'fieldtracer' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'plot' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'poloidal_grid' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'progress' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'rzline' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
WARNING: autodoc: failed to import module 'zoidberg' from module 'zoidberg'; the following exception was raised:
No module named 'zoidberg'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
looking for now-outdated files... /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/boundary_options.rst:120: WARNING: Footnote [#] is not referenced.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:447: WARNING: Title underline too short.

Working with an active ``conda`` environment
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata:1: WARNING: duplicate object description of boutdata, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.attributes:1: WARNING: duplicate object description of boutdata.attributes, other instance in _apidoc/boutdata, use :noindex: for one of them
/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/running_bout.rst:463: WARNING: Literal block expected; none found.
none found
pickling environment... done
checking consistency... done
preparing documents... WARNING: unsupported theme option 'repository_url' given
WARNING: unsupported theme option 'path_to_docs' given
WARNING: unsupported theme option 'use_edit_page_button' given
WARNING: unsupported theme option 'use_repository_button' given
WARNING: unsupported theme option 'use_issues_button' given
done
copying assets... WARNING: unsupported theme option 'home_page_in_toc' given
copying static files... done
copying extra files... done
done
writing output... [100%] user_docs/variable_init
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:81: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:87: WARNING: unknown document: '../_breathe_autogen/file/field2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:93: WARNING: unknown document: '../_breathe_autogen/file/field3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:100: WARNING: unknown document: '../_breathe_autogen/file/field__data_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:105: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:112: WARNING: unknown document: '../_breathe_autogen/file/initialprofiles_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/vecops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:117: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:124: WARNING: unknown document: '../_breathe_autogen/file/vector2d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:129: WARNING: unknown document: '../_breathe_autogen/file/vector3d_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:133: WARNING: unknown document: '../_breathe_autogen/file/where_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft__fftw_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/output_and_post.rst:581: WARNING: Could not lex literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/time_integration.rst:1013: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
generating indices... genindex py-modindex done
writing additional pages... search done
copying images... [100%] figs/init_balloon.png
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 114 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs/index.html
Generated HTML docs in file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/docs/index.html
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target sphinx-html
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gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color="
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gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'.
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[100%] Built target docs
gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 0

+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=mpicc
+ export CC
+ CXX=mpicxx
+ export CXX
+ /usr/bin/cmake -S . -B build_openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -DBOUT_USE_FFTW=ON -DBOUT_USE_NETCDF=ON -DBOUT_USE_SCOREP=OFF -DBOUT_USE_SYSTEM_MPARK_VARIANT=ON -DBOUT_USE_LAPACK=ON -DBOUT_USE_NLS=ON -DBOUT_USE_SYSTEM_FMT=ON -DBOUT_USE_UUID_SYSTEM_GENERATOR=ON -DCMAKE_INSTALL_PREFIX=/ -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_INCLUDEDIR=/usr/include/openmpi-x86_64/bout++/ -DCMAKE_INSTALL_DATAROOTDIR=/usr/share -DCMAKE_INSTALL_PYTHON_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi -DBOUT_BUILD_DOCS=ON -DBOUT_USE_PETSC=ON -DBOUT_USE_SUNDIALS=ON
-- The CXX compiler identification is GNU 13.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/lib64/openmpi/bin/mpicxx - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Configuring BOUT++ version 5.0.0
-- Found Python3: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Could NOT find ClangFormat (missing: ClangFormat_BIN) 
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ModuleNotFoundError: No module named 'zoidberg'
CMake Warning (dev) at CMakeLists.txt:373 (message):
  'src/field/generated_fieldops.cxx' will not be regenerated when you make
  changes to either 'src/field/gen_fieldops.py' or
  'src/field/gen_fieldops.jinja'.  This is because either Python3 or
  clang-format is missing (see above messages for more information) or
  BOUT_GENERATE_FIELDOPS is OFF (current value: OFF).  This warning is only
  important for BOUT++ developers and can otherwise be safely ignored.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found Python: /usr/bin/python3.12 (found suitable version "3.12.0", minimum required is "3.6") found components: Interpreter Development Development.Module Development.Embed 
-- Found Numpy: /usr/include (found version "1.24.4") 
-- Found Cython: TRUE (found version "3.0.2") 
-- Found Bash: /usr/bin/bash (found version "5.2.15") 
-- Building BOUT++ Python interface
-- Found MPI_CXX: /usr/lib64/openmpi/bin/mpicxx (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Enable OpenMP: OFF
-- HYPRE support: OFF
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") 
-- Checking for one of the modules 'PETSc>3.4.0;petsc>3.4.0'
-- Found PETSc: /usr/include/openmpi-x86_64/petsc  
-- PETSc support: ON
-- Using external mpark.variant
-- Using external fmt
-- PVODE support: ON
-- Found netCDF: /usr/lib64/libnetcdf.so (found version "4.9.0") 
-- Found netCDFCxx version 4.3.1
-- Found netCDFCxx: /usr/lib64/libnetcdf_c++4.so (found version "4.3.1") 
-- NetCDF support: ON
-- Found FFTW: /usr/lib64/libfftw3.so  
-- FFTW support: ON
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/lib64/libflexiblas.so  
-- Looking for cheev_
-- Looking for cheev_ - found
-- Found LAPACK: /usr/lib64/libflexiblas.so;-lm;-ldl  
-- LAPACK support: ON
-- SLEPc support: OFF
-- SUNDIALS support: ON
-- Found Gettext: /usr/bin/msgmerge (found version "0.22") 
-- Found Intl: built in to C library  
-- libuuid not found, using fallback UUID generator
-- UUID_SYSTEM_GENERATOR: FALSE
-- Enable coverage: OFF
-- Git revision: Unknown
-- Performing Test HAS_FLAG__Wnull_dereference
-- Performing Test HAS_FLAG__Wnull_dereference - Success
-- Warning flag is supported by compiler: -Wnull-dereference
-- Found negative flag: -Wno-cast-function-type
   replaced with -Wcast-function-type
-- Performing Test HAS_FLAG__Wno_cast_function_type
-- Performing Test HAS_FLAG__Wno_cast_function_type - Success
-- Warning flag is supported by compiler: -Wno-cast-function-type
-- Runtime checking level: CHECK=2
-- Message stack: BOUT_USE_MSGSTACK=ON
-- Extra debug output: BOUT_USE_OUTPUT_DEBUG=OFF
-- Signal handling: BOUT_USE_SIGNAL=ON
-- Output coloring: BOUT_USE_COLOR=ON
-- Field name tracking: BOUT_USE_TRACK=ON
-- Signalling floating point exceptions: BOUT_USE_SIGFPE=OFF
-- Enable backtrace: BOUT_USE_BACKTRACE=ON
-- Performing Test HAS_PRETTY_FUNCTION
-- Performing Test HAS_PRETTY_FUNCTION - Success
-- Setting build type to 'RelWithDebInfo' as none was specified.
CMake Deprecation Warning at externalpackages/googletest/CMakeLists.txt:4 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- The C compiler identification is GNU 13.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/lib64/openmpi/bin/mpicc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
CMake Deprecation Warning at externalpackages/googletest/googlemock/CMakeLists.txt:45 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at externalpackages/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Found Python: /usr/bin/python3.12 (found version "3.12.0") found components: Interpreter 
-- Not building test test-laplace-hypre3d, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-laplacexy2-hypre, requirement not met: BOUT_HAS_HYPRE
-- Not building test test-slepc-solver, requirement not met: BOUT_HAS_SLEPC
-- Not building test MMS-advection-arakawa, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-central, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-upwind, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-advection-weno3, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-diffusion2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-hw, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-laplace, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-advection, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dx2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-d2dz2, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-diffusion, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-spatial-fci, requirement not met: zoidberg_FOUND
-- Not building test MMS-time, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building test MMS-time-petsc, requirement not met: BOUT_RUN_ALL_TESTS
-- Not building example test_laplacexy_hypre, requirement not met: BOUT_HAS_HYPRE
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot 
-- Found Sphinx: /usr/bin/sphinx-build  

   --------------------------------
     BOUT++ Configuration Summary
   --------------------------------

   Bundled PVODE support    : ON
   PETSc support            : ON
   SLEPc support            : OFF
   SUNDIALS support         : ON
   HYPRE support            : OFF
   NetCDF support           : ON
   FFTW support             : ON
   LAPACK support           : ON
   OpenMP support           : OFF
   Natural language support : ON
   ScoreP support           : OFF
   System UUID generator    : FALSE
   Extra debug output       : OFF
   Runtime error check level: 2
   Signal handling          : ON
   Output coloring          : ON
   Field name tracking      : ON
   Floating point exceptions: OFF
   Backtrace enabled        : ON
   RAJA enabled             : OFF
   Umpire enabled           : OFF
   Caliper enabled          : OFF
   CUDA enabled             : OFF
   Metric type              : 2D
   Python API support       : ON
   Sanitizers enabled       : None

   === Python ===

   Make sure that the tools/pylib directory is in your PYTHONPATH
   e.g. by adding to your ~/.bashrc file

       export PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib:/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib:$PYTHONPATH

*** Now run `cmake --build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi` to compile BOUT++ ***

-- Configuring done (6.3s)
-- Generating done (0.3s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi
+ /usr/bin/cmake --build build_openmpi -j2 --verbose
Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -MF CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o.d -o CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/pvbbdpre.cpp
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvode.cpp.o -MF CMakeFiles/pvode.dir/source/cvode.cpp.o.d -o CMakeFiles/pvode.dir/source/cvode.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘void* pvode::CVodeMalloc(integer, RhsFn, real, N_Vector, int, int, int, real*, void*, void*, FILE*, int, long int*, real*, void*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:178:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘pvode::integer’ {aka ‘int’} [-Wformat=]
  178 | #define CVM             "CVodeMalloc-- "
      |                         ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:19: note: in expansion of macro ‘CVM’
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                   ^~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:496:17: note: in expansion of macro ‘MSG_BAD_N’
  496 |     fprintf(fp, MSG_BAD_N, N);
      |                 ^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:182:28: note: format string is defined here
  182 | #define MSG_BAD_N CVM "N=%ld < 1 illegal.\n\n"
      |                          ~~^
      |                            |
      |                            long int
      |                          %d
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvpre_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvpre.dir/precon/band.cpp.o -MF CMakeFiles/pvpre.dir/precon/band.cpp.o.d -o CMakeFiles/pvpre.dir/precon/band.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp
In function ‘pvode::CVnlsFunctional(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1826:45,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1876:49: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 1876 |     if ((m==maxcor) || ((m >= 2) && (del > RDIV * delp)))
      |                                                 ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1843:13: note: ‘delp’ was declared here
 1843 |   real del, delp, dcon;
      |             ^~~~
In function ‘pvode::CVNewtonIteration(pvode::CVodeMemRec*)’,
    inlined from ‘pvode::CVnlsNewton(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1944:28,
    inlined from ‘pvode::CVnls(pvode::CVodeMemRec*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1827:41,
    inlined from ‘pvode::CVStep(pvode::CVodeMemRec*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1358:18,
    inlined from ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:882:19:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:2021:50: warning: ‘delp’ may be used uninitialized [-Wmaybe-uninitialized]
 2021 |     if ((m == maxcor) || ((m >= 2) && (del > RDIV*delp))) {
      |                                                  ^
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp: In function ‘pvode::CVode(void*, double, pvode::nvec_type*, double*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvode.cpp:1971:13: note: ‘delp’ was declared here
 1971 |   real del, delp, dcon;
      |             ^~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp: In function ‘pvode::integer pvode::gbfa(real**, integer, integer, integer, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/precon/band.cpp:189:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
  189 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/nvector.cpp.o -MF CMakeFiles/pvode.dir/source/nvector.cpp.o.d -o CMakeFiles/pvode.dir/source/nvector.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:429: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  429 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:485: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  485 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:543: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  543 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:565: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  565 |   #pragma omp parallel for reduction(+: sum)
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:583: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  583 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:698: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  698 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:714: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  714 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:730: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  730 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:745: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  745 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:761: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  761 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:777: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  777 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:793: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  793 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:809: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  809 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:824: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  824 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:831: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  831 |     #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:837: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  837 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:850: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  850 |   #pragma omp parallel for
      | 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘void pvode::N_VLinearSum(real, N_Vector, real, N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:189:12: warning: unused variable ‘v’ [-Wunused-variable]
  189 |   N_Vector v, v1, v2;
      |            ^
[  0%] Linking CXX shared library ../../lib/libpvpre.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvpre.dir/link.txt --verbose=1
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp: In function ‘pvode::real pvode::N_VWL2Norm(N_Vector, N_Vector)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/nvector.cpp:533:14: warning: variable ‘N_global’ set but not used [-Wunused-but-set-variable]
  533 |   integer N, N_global;
      |              ^~~~~~~~
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvpre.so.1.0.0 -o ../../lib/libpvpre.so.1.0.0 CMakeFiles/pvpre.dir/precon/pvbbdpre.cpp.o CMakeFiles/pvpre.dir/precon/band.cpp.o 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so.1.0.0 ../../lib/libpvpre.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/llnlmath.cpp.o -MF CMakeFiles/pvode.dir/source/llnlmath.cpp.o.d -o CMakeFiles/pvode.dir/source/llnlmath.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/llnlmath.cpp
[  0%] Built target pvpre
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/mofiles.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f CMakeFiles/mofiles.dir/build.make CMakeFiles/mofiles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Generating locale/es/libbout.gmo, _mo_file_es
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/es/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/es/libbout.po
[  2%] Generating locale/de/libbout.gmo, _mo_file_de
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/de/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/de/libbout.po
[  2%] Generating locale/fr/libbout.gmo, _mo_file_fr
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/fr/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/fr/libbout.po
[  2%] Generating locale/zh_CN/libbout.gmo, _mo_file_zh_CN
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_CN/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_CN/libbout.po
[  5%] Generating locale/zh_TW/libbout.gmo, _mo_file_zh_TW
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_TW/
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea && /usr/bin/msgfmt -o /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/locale/zh_TW/libbout.gmo /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/locale/zh_TW/libbout.po
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  5%] Built target mofiles
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -MF CMakeFiles/pvode.dir/source/cvspgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvspgmr.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/spgmr.cpp.o -MF CMakeFiles/pvode.dir/source/spgmr.cpp.o.d -o CMakeFiles/pvode.dir/source/spgmr.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp: In function ‘int pvode::SpgmrSolve(SpgmrMem, void*, N_Vector, N_Vector, int, int, real, int, void*, N_Vector, N_Vector, ATimesFn, PSolveFn, real*, int*, int*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:8: warning: unused variable ‘s_r0_norm’ [-Wunused-variable]
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |        ^~~~~~~~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/iterativ.cpp.o -MF CMakeFiles/pvode.dir/source/iterativ.cpp.o.d -o CMakeFiles/pvode.dir/source/iterativ.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/iterativ.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:328:17: warning: ‘krydim’ may be used uninitialized [-Wmaybe-uninitialized]
  328 |     for (i=1; i <= krydim; i++) yg[i]=ZERO;
      |               ~~^~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:161:36: note: ‘krydim’ was declared here
  161 |   int i, j, k, l, l_plus_1, l_max, krydim, ier, ntries;
      |                                    ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:386:3: warning: ‘rho’ may be used uninitialized [-Wmaybe-uninitialized]
  386 |   if (rho < beta) {
      |   ^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/spgmr.cpp:159:62: note: ‘rho’ was declared here
  159 |   real s_r0_norm, beta, rotation_product, r_norm, s_product, rho;
      |                                                              ^~~
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/cvdiag.cpp.o -MF CMakeFiles/pvode.dir/source/cvdiag.cpp.o.d -o CMakeFiles/pvode.dir/source/cvdiag.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/cvdiag.cpp
[  8%] Building CXX object externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/lib64/openmpi/bin/mpicxx -Dpvode_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT externalpackages/PVODE/CMakeFiles/pvode.dir/source/smalldense.cpp.o -MF CMakeFiles/pvode.dir/source/smalldense.cpp.o.d -o CMakeFiles/pvode.dir/source/smalldense.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp: In function ‘pvode::integer pvode::gefa(real**, integer, integer*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/source/smalldense.cpp:82:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
   82 |     if (swap = (l != k)) {
      |         ~~~~~^~~~~~~~~~
[ 11%] Linking CXX shared library ../../lib/libpvode.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_link_script CMakeFiles/pvode.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libpvode.so.1.0.0 -o ../../lib/libpvode.so.1.0.0 CMakeFiles/pvode.dir/source/cvode.cpp.o CMakeFiles/pvode.dir/source/nvector.cpp.o CMakeFiles/pvode.dir/source/llnlmath.cpp.o CMakeFiles/pvode.dir/source/cvspgmr.cpp.o CMakeFiles/pvode.dir/source/spgmr.cpp.o CMakeFiles/pvode.dir/source/iterativ.cpp.o CMakeFiles/pvode.dir/source/cvdiag.cpp.o CMakeFiles/pvode.dir/source/smalldense.cpp.o 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE && /usr/bin/cmake -E cmake_symlink_library ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvode.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 11%] Built target pvode
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 11%] Generating bout++-time.cxx
/usr/bin/cmake -P /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/cmake/GenerateDateTimeFile.cmake
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/bout++.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/bout++.cxx.o -MF CMakeFiles/bout++.dir/src/bout++.cxx.o.d -o CMakeFiles/bout++.dir/src/bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/bout++.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field.cxx.o -MF CMakeFiles/bout++.dir/src/field/field.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field2d.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/field2d.cxx.o -MF CMakeFiles/bout++.dir/src/field/field2d.cxx.o.d -o CMakeFiles/bout++.dir/src/field/field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/field2d.cxx
[ 14%] Building CXX object CMakeFiles/bout++.dir/src/field/field3d.cxx.o
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_data.cxx.o
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/field_factory.cxx.o
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[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgenerators.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgenerators.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldgroup.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldgroup.cxx
[ 17%] Building CXX object CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -MF CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o.d -o CMakeFiles/bout++.dir/src/field/fieldperp.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/fieldperp.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -MF CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o.d -o CMakeFiles/bout++.dir/src/field/generated_fieldops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/generated_fieldops.cxx
[ 20%] Building CXX object CMakeFiles/bout++.dir/src/field/globalfield.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -MF CMakeFiles/bout++.dir/src/field/globalfield.cxx.o.d -o CMakeFiles/bout++.dir/src/field/globalfield.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/field/globalfield.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/cyclic/cyclic_laplace.cxx
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[ 35%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/spt/spt.cxx.o
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[ 35%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/hypre3d/hypre3d_laplace.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy/laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy/laplacexy.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexy2/laplacexy2_hypre.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexy2/laplacexy2_hypre.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invert/laplacexy2_hypre.hxx:41:2: warning: #warning LaplaceXY requires Hypre. No LaplaceXY available [-Wcpp]
   41 | #warning LaplaceXY requires Hypre. No LaplaceXY available
      |  ^~~~~~~
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/cyclic/laplacexz-cyclic.cxx
[ 38%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/impls/petsc/laplacexz-petsc.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -MF CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/laplacexz/laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplacexz/laplacexz.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/impls/cyclic/cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/impls/cyclic/cyclic.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -MF CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o.d -o CMakeFiles/bout++.dir/src/invert/parderiv/invert_parderiv.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/parderiv/invert_parderiv.cxx
[ 41%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_factory.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_factory.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_region.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/boundary_standard.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In function ‘void verifyNumPoints(BoundaryRegion*, int)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:80:21: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
   80 |     if (mesh->firstY()) {
      |         ~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_factory.hxx:32,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:83:20: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
   83 |     if (mesh->lastY()) {
      |         ~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:473:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  473 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  474 |                                t);
      |                                ~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field_data.hxx:51,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:39,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_op.hxx:9,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/boundary_standard.hxx:6:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:517:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  517 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
  518 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O3::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:978:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
  978 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  979 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryDirichlet_O4::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:1444:31: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 1444 |             val = fg->generate(xnorm, TWOPI * ynorm, TWOPI * (zk - 0.5) / (mesh->LocalNz),
      |                   ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1445 |                                t);
      |                                ~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx: In member function ‘virtual void BoundaryNeumann::apply(Field3D&, BoutReal)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/boundary_standard.cxx:2152:33: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
 2152 |               val = fg->generate(xnorm, TWOPI * ynorm,
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
 2153 |                                  TWOPI * (zk - 0.5) / (mesh->LocalNz), t);
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates.cxx
[ 44%] Building CXX object CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/coordinates_accessor.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/coordinates_accessor.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromfile.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromfile.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/data/gridfromoptions.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/data/gridfromoptions.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/difops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/difops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/difops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/difops.cxx
[ 47%] Building CXX object CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/fv_ops.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx: In function ‘FV::communicateFluxes(Field3D&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:517:15: warning: ‘xout’ may be used uninitialized [-Wmaybe-uninitialized]
  517 |     mesh->wait(xout);
      |     ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/fv_ops.cxx:488:20: note: ‘xout’ was declared here
  488 |   comm_handle xin, xout;
      |                    ^~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/impls/bout/boutmesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/index_derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/index_derivs.cxx
In file included from /usr/include/c++/13/bits/shared_ptr.h:53,
                 from /usr/include/c++/13/memory:80,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field.hxx:36,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:34,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/options.hxx:43,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/deriv_store.hxx:42,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:48,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.hxx:8,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:36:
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field3D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field3d.hxx:203:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2262:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
In member function ‘std::__shared_ptr<ArrayData<double>, (__gnu_cxx::_Lock_policy)2>::operator bool() const’,
    inlined from ‘std::operator==<ArrayData<double> >(std::shared_ptr<ArrayData<double> > const&, decltype(nullptr))bool’ at /usr/include/c++/13/bits/shared_ptr.h:562:14,
    inlined from ‘Array<double, ArrayData<double> >::empty() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/array.hxx:270:44,
    inlined from ‘Field2D::isAllocated() const’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/field2d.hxx:106:48,
    inlined from ‘BoutMesh::pack_data(std::vector<FieldData*, std::allocator<FieldData*> > const&, int, int, int, int, double*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/impls/bout/boutmesh.cxx:2273:7:
/usr/include/c++/13/bits/shared_ptr_base.h:1670:16: warning: potential null pointer dereference [-Wnull-dereference]
 1670 |       { return _M_ptr != nullptr; }
      |                ^~~~~~
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation_xz.cxx
[ 50%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/bilinear_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/bilinear_xz.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_xz.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/hermite_spline_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/hermite_spline_z.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/interpolation_z.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/interpolation_z.cxx
[ 52%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/lagrange_4pt_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/lagrange_4pt_xz.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/interpolation/monotonic_hermite_spline_xz.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/mesh.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/mesh.cxx
[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/fci.cxx.o
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[ 55%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/identity.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel/shiftedmetric.cxx.o
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[ 58%] Building CXX object CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/parallel_boundary_region.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/parallel_boundary_region.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -MF CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o.d -o CMakeFiles/bout++.dir/src/mesh/surfaceiter.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/mesh/surfaceiter.cxx
[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/gyro_average.cxx.o
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[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/smoothing.cxx.o
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[ 61%] Building CXX object CMakeFiles/bout++.dir/src/physics/snb.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/snb.cxx.o -MF CMakeFiles/bout++.dir/src/physics/snb.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/snb.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -MF CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o.d -o CMakeFiles/bout++.dir/src/physics/sourcex.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/physics/sourcex.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/adams_bashforth/adams_bashforth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/adams_bashforth/adams_bashforth.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/arkode/arkode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/arkode/arkode.cxx
[ 64%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/cvode/cvode.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:378:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  378 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:49:
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:416:37: warning: ‘int CVSpilsSetPreconditioner(void*, CVSpilsPrecSetupFn, CVSpilsPrecSolveFn)’ is deprecated: use CVodeSetPreconditioner instead [-Wdeprecated-declarations]
  416 |         if (CVSpilsSetPreconditioner(cvode_mem, nullptr, cvode_pre_shim)) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:49:5: note: declared here
   49 | int CVSpilsSetPreconditioner(void *cvode_mem, CVSpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:428:33: warning: ‘int CVSpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use CVodeSetLinearSolver instead [-Wdeprecated-declarations]
  428 |       if (CVSpilsSetLinearSolver(cvode_mem, sun_solver) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:43:5: note: declared here
   43 | int CVSpilsSetLinearSolver(void *cvode_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:442:29: warning: ‘int CVSpilsSetJacTimes(void*, CVSpilsJacTimesSetupFn, CVSpilsJacTimesVecFn)’ is deprecated: use CVodeSetJacTimes instead [-Wdeprecated-declarations]
  442 |       if (CVSpilsSetJacTimes(cvode_mem, nullptr, cvode_jac) != CV_SUCCESS) {
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:53:5: note: declared here
   53 | int CVSpilsSetJacTimes(void *cvode_mem, CVSpilsJacTimesSetupFn jtsetup,
      |     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx: In member function ‘virtual int CvodeSolver::run()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:533:28: warning: ‘int CVSpilsGetNumPrecSolves(void*, long int*)’ is deprecated: use CVodeGetNumPrecSolves instead [-Wdeprecated-declarations]
  533 |     CVSpilsGetNumPrecSolves(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:64:5: note: declared here
   64 | int CVSpilsGetNumPrecSolves(void *cvode_mem, long int *npsolves);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/cvode/cvode.cxx:535:26: warning: ‘int CVSpilsGetNumLinIters(void*, long int*)’ is deprecated: use CVodeGetNumLinIters instead [-Wdeprecated-declarations]
  535 |     CVSpilsGetNumLinIters(cvode_mem, &temp_long_int);
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/cvode/cvode_spils.h:67:5: note: declared here
   67 | int CVSpilsGetNumLinIters(void *cvode_mem, long int *nliters);
      |     ^~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/euler/euler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/euler/euler.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/ida/ida.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/imex-bdf2/imex-bdf2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:679:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  679 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/imex-bdf2/imex-bdf2.cxx:681:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  681 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx: In member function ‘virtual int IdaSolver::init()’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:199:30: warning: ‘int IDASpilsSetLinearSolver(void*, SUNLinearSolver)’ is deprecated: use IDASetLinearSolver instead [-Wdeprecated-declarations]
  199 |   if (IDASpilsSetLinearSolver(idamem, sun_solver) != IDA_SUCCESS) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:45:
/usr/include/openmpi-x86_64/ida/ida_spils.h:44:5: note: declared here
   44 | int IDASpilsSetLinearSolver(void *ida_mem, SUNLinearSolver LS);
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/ida/ida.cxx:234:36: warning: ‘int IDASpilsSetPreconditioner(void*, IDASpilsPrecSetupFn, IDASpilsPrecSolveFn)’ is deprecated: use IDASetPreconditioner instead [-Wdeprecated-declarations]
  234 |       if (IDASpilsSetPreconditioner(idamem, nullptr, ida_pre_shim)) {
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/openmpi-x86_64/ida/ida_spils.h:47:5: note: declared here
   47 | int IDASpilsSetPreconditioner(void *ida_mem, IDASpilsPrecSetupFn pset,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/petsc/petsc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  264 |   ierr = PetscOptionsGetBool(PETSC_NULL, PETSC_NULL, "-interpolate", &interpolate,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~    
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:264:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:265:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  265 |                              PETSC_NULL);
      |             ^                ~~~~~~~~~~~~                                             
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  276 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-output_name", this->output_name,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:276:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:287:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  287 |     ierr = SNESMonitorSet(snes, PetscSNESMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:290:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  290 |     ierr = TSMonitorSet(ts, PetscMonitor, this, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  402 |   ierr = PetscOptionsGetString(PETSC_NULL, PETSC_NULL, "-J_load", load_file,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:402:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:454:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  454 |     ierr = MatSeqAIJSetPreallocation(J, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  456 |     ierr = MatMPIAIJSetPreallocation(J, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:456:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:461:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  461 |     ierr = MatSeqBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                  
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  463 |     ierr = MatMPIBAIJSetPreallocation(J, dof, prealloc, PETSC_NULL, prealloc, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:463:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  466 |     ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_slowfd", &J_slowfd);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:466:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:473:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  473 |       ierr = SNESSetJacobian(snes, J, J, SNESComputeJacobianDefault, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~     
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  527 |   ierr = PetscOptionsHasName(PETSC_NULL, PETSC_NULL, "-J_write", &J_write);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:527:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  879 |   ierr = SNESGetJacobian(snes, &A, &B, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                       
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:879:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  893 |   ierr = SNESGetFunction(snes, &F, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:893:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  916 |   ierr = SNESGetFunction(snes, &func, PETSC_NULL, PETSC_NULL);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                        
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/petsc/petsc.cxx:916:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
[ 70%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/power/power.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/power/power.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/rkgeneric/rkscheme.cxx
[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/slepc/slepc.cxx
[ 76%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:567:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  567 |           PETSC_NULL,
      |             ^~~~~~~~~                                                                 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/snes/snes.cxx:569:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
  569 |           PETSC_NULL, &Jmf);
      |             ^~~~~~~~~~~~~~~~                                                          
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -MF CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/impls/split-rk/split-rk.cxx
[ 79%] Building CXX object CMakeFiles/bout++.dir/src/solver/solver.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/solver/solver.cxx.o -MF CMakeFiles/bout++.dir/src/solver/solver.cxx.o.d -o CMakeFiles/bout++.dir/src/solver/solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/solver/solver.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -MF CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/bout_types.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutcomm.cxx
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/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -MF CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/boutexception.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/derivs.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -MF CMakeFiles/bout++.dir/src/sys/derivs.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/derivs.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -MF CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx: In member function ‘virtual double FieldGenerator::generate(const bout::generator::Context&)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:43:18: warning: ‘virtual double FieldGenerator::generate(BoutReal, BoutReal, BoutReal, BoutReal)’ is deprecated: This will be removed in a future version. Implementations should override the Context version of this function. [-Wdeprecated-declarations]
   43 |   return generate(ctx.x(), ctx.y(), ctx.z(), ctx.t());
      |          ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/expressionparser.cxx:25:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/sys/expressionparser.hxx:70:3: note: declared here
   70 |   generate(BoutReal x, BoutReal y, BoutReal z, BoutReal t) {
      |   ^~~~~~~~
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -MF CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/generator_context.cxx
[ 82%] Building CXX object CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/hyprelib.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -MF CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/msg_stack.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_ini.cxx
[ 85%] Building CXX object CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -MF CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx
In file included from /usr/include/openmpi-x86_64/ncFile.h:2,
                 from /usr/include/openmpi-x86_64/netcdf:16,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/options/options_netcdf.cxx:14:
/usr/include/openmpi-x86_64/ncGroup.h:18:14: warning: ‘netCDF::file_id’ defined but not used [-Wunused-variable]
   18 |   static int file_id;
      |              ^~~~~~~
[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o
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[ 88%] Building CXX object CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o
/usr/lib64/openmpi/bin/mpicxx -DBOUT_FLAGS_STRING="  -Wall -Wextra     -Wnull-dereference   -Wno-cast-function-type   -DCHECK=2 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer-O2 -g -DNDEBUG" -DCHECK=2 -DFMT_SHARED -Dbout___EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wextra -Wnull-dereference -Wno-cast-function-type -MD -MT CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -MF CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o.d -o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/sys/petsclib.cxx:29:13: warning: PETSC_NULL is deprecated, use PETSC_NULLPTR instead (since version 3.19)
   29 |       PetscInitialize(pargc, pargv, PETSC_NULL, help);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                
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CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf34/rkf34.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/impls/rkf45/rkf45.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkgeneric.cxx.o CMakeFiles/bout++.dir/src/solver/impls/rkgeneric/rkscheme.cxx.o CMakeFiles/bout++.dir/src/solver/impls/slepc/slepc.cxx.o CMakeFiles/bout++.dir/src/solver/impls/snes/snes.cxx.o "CMakeFiles/bout++.dir/src/solver/impls/split-rk/split-rk.cxx.o" CMakeFiles/bout++.dir/src/solver/solver.cxx.o CMakeFiles/bout++.dir/src/sys/bout_types.cxx.o CMakeFiles/bout++.dir/src/sys/boutcomm.cxx.o CMakeFiles/bout++.dir/src/sys/boutexception.cxx.o CMakeFiles/bout++.dir/src/sys/derivs.cxx.o CMakeFiles/bout++.dir/src/sys/expressionparser.cxx.o CMakeFiles/bout++.dir/src/sys/generator_context.cxx.o CMakeFiles/bout++.dir/src/sys/hyprelib.cxx.o CMakeFiles/bout++.dir/src/sys/msg_stack.cxx.o CMakeFiles/bout++.dir/src/sys/options.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_ini.cxx.o CMakeFiles/bout++.dir/src/sys/options/options_netcdf.cxx.o CMakeFiles/bout++.dir/src/sys/optionsreader.cxx.o CMakeFiles/bout++.dir/src/sys/output.cxx.o CMakeFiles/bout++.dir/src/sys/petsclib.cxx.o CMakeFiles/bout++.dir/src/sys/range.cxx.o CMakeFiles/bout++.dir/src/sys/slepclib.cxx.o CMakeFiles/bout++.dir/src/sys/timer.cxx.o CMakeFiles/bout++.dir/src/sys/type_name.cxx.o CMakeFiles/bout++.dir/src/sys/utils.cxx.o "CMakeFiles/bout++.dir/bout++-time.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/libfmt.so.10.0.0 lib/libpvode.so.1.0.0 lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl -ldl /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libnetcdf.so /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx: In member function ‘__ct_base ’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/src/invert/laplace/impls/spt/spt.cxx:68:37: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   68 |   alldata = new SPT_data[ye - ys + 1];
      |                                     ^
/usr/include/c++/13/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
  128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
      |                          ^
/usr/bin/cmake -E cmake_symlink_library lib/libbout++.so.5.0.0 lib/libbout++.so.5.0.0 lib/libbout++.so
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 94%] Built target bout++
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 97%] Generating resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
[ 97%] Generating boutcpp.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py resolve_enum.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/resolve_enum.pxd
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutcpp.pxd.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutcpp.pxd
[ 97%] Generating boutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py boutpp.pyx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutpp.pyx
[100%] Generating helper.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.cxx.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
[100%] Generating helper.h
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E make_directory /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build && /usr/bin/cmake -E env PYTHONPATH=/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/..: /usr/bin/python3.12 generate.py helper.h.jinja /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.h
[100%] Cythonizing python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy boutpp.pyx libboutpp.pyx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/python3.12 -m cython libboutpp.pyx --cplus -3 -X binding=True -X embedsignature=True
warning: resolve_enum.pxd:49:21: 'deflt' redeclared 
warning: resolve_enum.pxd:189:24: 'Standard' redeclared 
warning: resolve_enum.pxd:223:15: 'Standard' redeclared 
warning: bout_options.pxd:22:21: Rvalue-reference as function argument not supported
warning: bout_options.pxd:24:32: Rvalue-reference as function argument not supported
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/gmake  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/helper.cxx
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp
In file included from /usr/include/numpy/ndarraytypes.h:1940,
                 from /usr/include/numpy/ndarrayobject.h:12,
                 from /usr/include/numpy/arrayobject.h:5,
                 from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:1195:
/usr/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
[100%] Building CXX object tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -Dboutpp_cpython_312_x86_64_linux_gnu_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build -I/usr/include/python3.12 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -MD -MT tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -MF CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o.d -o CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/boutexception_helper.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:40870:46: warning: ‘__pyx_obj_9libboutpp_Vector2D* __pyx_f_9libboutpp_v2dFromObj(Vector2D)’ defined but not used [-Wunused-function]
40870 | static struct __pyx_obj_9libboutpp_Vector2D *__pyx_f_9libboutpp_v2dFromObj(Vector2D __pyx_v_i) {
      |                                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_f_12resolve_enum_resolve_cell_loc(_object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:9213:10: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
 9213 |   return __pyx_r;
      |          ^~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:8856:12: note: ‘__pyx_r’ was declared here
 8856 |   CELL_LOC __pyx_r;
      |            ^~~~~~~
In function ‘__pyx_pf_9libboutpp_48bracket(_object*, __pyx_obj_9libboutpp_Field3D*, __pyx_obj_9libboutpp_Field3D*, _object*, _object*)’,
    inlined from ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’ at /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:63928:42:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:64022:65: warning: ‘__pyx_r’ may be used uninitialized [-Wmaybe-uninitialized]
64022 |   __pyx_t_1 = ((PyObject *)__pyx_f_9libboutpp_f3dFromObj(bracket((__pyx_v_a->cobj[0]), (__pyx_v_b->cobj[0]), __pyx_v_method_, __pyx_v_outloc_))); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 2901, __pyx_L1_error)
      |                                                          ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp: In function ‘__pyx_pw_9libboutpp_49bracket(_object*, _object* const*, long, _object*)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/libboutpp.cpp:10724:18: note: ‘__pyx_r’ was declared here
10724 |   BRACKET_METHOD __pyx_r;
      |                  ^~~~~~~
[100%] Linking CXX shared library libboutpp.cpython-312-x86_64-linux-gnu.so
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/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libboutpp.cpython-312-x86_64-linux-gnu.so -o libboutpp.cpython-312-x86_64-linux-gnu.so "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/libboutpp.cpp.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/helper.cxx.o" "CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/boutexception_helper.cxx.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib: ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
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Change Dir: '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual'

Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2
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/usr/lib/python3.12/site-packages/boututils/calculus.py:docstring of boututils.calculus.deriv2D:14: ERROR: Unexpected indentation.
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/api_reference.rst:4: WARNING: toctree glob pattern '_breathe_autogen/*' didn't match any documents
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/file_io.rst:114: ERROR: Unknown interpreted text role "py".
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Working with an active ``conda`` environment
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:453: ERROR: Unexpected indentation.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/installing.rst:454: WARNING: Block quote ends without a blank line; unexpected unindent.
/usr/lib/python3.12/site-packages/boututils/__init__.py:docstring of boututils:1: WARNING: duplicate object description of boututils, other instance in _apidoc/boututils, use :noindex: for one of them
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/usr/lib/python3.12/site-packages/boutdata/__init__.py:docstring of boutdata.collect.collect:1: WARNING: duplicate object description of boutdata.collect, other instance in _apidoc/boutdata, use :noindex: for one of them
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:139: WARNING: unknown document: '../_breathe_autogen/file/fft_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:148: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:154: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:156: WARNING: unknown document: '../_breathe_autogen/file/serial__tri_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:160: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:162: WARNING: unknown document: '../_breathe_autogen/file/serial__band_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:166: WARNING: unknown document: '../_breathe_autogen/file/spt_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:168: WARNING: unknown document: '../_breathe_autogen/file/spt_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:173: WARNING: unknown document: '../_breathe_autogen/file/invert__parderiv_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:181: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:183: WARNING: unknown document: '../_breathe_autogen/file/cyclic_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:187: WARNING: unknown document: '../_breathe_autogen/file/lapack__routines_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:191: WARNING: unknown document: '../_breathe_autogen/file/boundary__factory_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:195: WARNING: unknown document: '../_breathe_autogen/file/boundary__region_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:200: WARNING: unknown document: '../_breathe_autogen/file/boundary__standard_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:204: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:209: WARNING: unknown document: '../_breathe_autogen/file/interpolation_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:212: WARNING: unknown document: '../_breathe_autogen/file/mesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:220: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:224: WARNING: unknown document: '../_breathe_autogen/file/boutmesh_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:229: WARNING: unknown document: '../_breathe_autogen/file/gyro__average_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:231: WARNING: unknown document: '../_breathe_autogen/file/smoothing_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:234: WARNING: unknown document: '../_breathe_autogen/file/sourcex_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:240: WARNING: unknown document: '../_breathe_autogen/file/solver_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:247: WARNING: unknown document: '../_breathe_autogen/file/cvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:251: WARNING: unknown document: '../_breathe_autogen/file/cvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:255: WARNING: unknown document: '../_breathe_autogen/file/ida_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:259: WARNING: unknown document: '../_breathe_autogen/file/ida_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:263: WARNING: unknown document: '../_breathe_autogen/file/petsc_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:266: WARNING: unknown document: '../_breathe_autogen/file/petsc_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:270: WARNING: unknown document: '../_breathe_autogen/file/pvode_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:274: WARNING: unknown document: '../_breathe_autogen/file/pvode_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:278: WARNING: unknown document: '../_breathe_autogen/file/boutcomm_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:280: WARNING: unknown document: '../_breathe_autogen/file/boutexception_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/derivs_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:283: WARNING: unknown document: '../_breathe_autogen/file/difops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:289: WARNING: unknown document: '../_breathe_autogen/file/msg__stack_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:296: WARNING: unknown document: '../_breathe_autogen/file/options_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:300: WARNING: unknown document: '../_breathe_autogen/file/optionsreader_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:302: WARNING: unknown document: '../_breathe_autogen/file/output_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:304: WARNING: unknown document: '../_breathe_autogen/file/range_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:308: WARNING: unknown document: '../_breathe_autogen/file/timer_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:312: WARNING: unknown document: '../_breathe_autogen/file/utils_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:318: WARNING: unknown document: '../_breathe_autogen/file/optionparser_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:320: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/code_layout.rst:322: WARNING: unknown document: '../_breathe_autogen/file/options__ini_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/developer_docs/mesh.rst:31: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field2d_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/field3d_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/algebraic_operators.rst:8: WARNING: unknown document: '../_breathe_autogen/file/fieldperp_8hxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:530: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/differential_operators.rst:538: WARNING: unknown document: '../_breathe_autogen/file/fv__ops_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/laplacian.rst:185: WARNING: unknown document: '../_breathe_autogen/file/invert__laplace_8cxx'
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/output_and_post.rst:581: WARNING: Could not lex literal_block 'AppendTo[$Path,"/full/path/to/BOUT/tools/mathematicalib"]' as "mathematica". Highlighting skipped.
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual/sphinx/user_docs/time_integration.rst:1013: WARNING: unknown document: '../_breathe_autogen/file/bout_09_09_8cxx'
generating indices... genindex py-modindex done
writing additional pages... search done
copying images... [100%] figs/init_balloon.png
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 114 warnings.

The HTML pages are in docs.
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual && /usr/bin/cmake -E echo Generated\ HTML\ docs\ in\ file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs/index.html
Generated HTML docs in file:///builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/docs/index.html
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[100%] Built target sphinx-html
/usr/bin/gmake  -f manual/CMakeFiles/docs.dir/build.make manual/CMakeFiles/docs.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/manual/CMakeFiles/docs.dir/DependInfo.cmake "--color="
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gmake[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
gmake[2]: Nothing to be done for 'manual/CMakeFiles/docs.dir/build'.
gmake[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[100%] Built target docs
gmake[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 0

+ '[' openmpi = mpich ']'
+ '[' openmpi = openmpi ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.iYARoM
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
++ dirname /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ /usr/bin/cmake --install build_mpich
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutpp/__init__.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libpvode.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libpvode.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libpvpre.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libpvpre.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so.5.0.0
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so.5.0.0" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/invert_laplace.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/field_factory.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/difops.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/traits.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/template_combinations.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/variant.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/uncopyable.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/type_name.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/timer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/range.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/gettext.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/generator_context.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sys/expressionparser.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/surfaceiter.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/solverfactory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/solver.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/snb.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/slepclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/single_index_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/scorepwrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rvec.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rkscheme.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/rajalib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/physicsmodel.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/petsc_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/paralleltransform.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/output_bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/operatorstencil.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/openmpwrap.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mpi_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/monitor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mesh.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/macro_for_each.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2_hypre.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy2.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/invert/laplacexy.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/index_derivs_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/index_derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/hyprelib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/hypre_interface.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/griddata.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globalindexer.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/globalfield.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/generic_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fv_ops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/format.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fieldgroup.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/expr.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/deriv_store.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/coordinates_accessor.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/coordinates.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/constants.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/caliper_wrapper.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/build_config.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout_enum_class.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/boundary_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/assert.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/array.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_standard.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/boundary_factory.hxx
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/build_defines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/revision.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/mpich-x86_64/bout++/bout/version.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout_4to5
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout_3to4.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-macro-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-header-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-format-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-v5-factory-upgrader.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-stop-script
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-sonnet
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-log-color
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-changelog-generator.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-build-deps.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-boutdata-restart-create
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-archive-helper.sh
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-add-mod-path
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/bin/bout-config
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Targets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Targets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++Config.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/mpich/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/mpich/boutconfig/__init__.py
++ grep /libbout
++ find /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so: RUNPATH=:/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/mpich/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/mpich/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/mpich/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: RUNPATH=:/usr/lib64/mpich/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/mpich/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/mpich/lib
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/bout++
+ mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ /usr/bin/cmake --install build_mpich/manual
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//searchindex.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/init_balloon.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/stagLocations.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/sod_result.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/snb-step.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/par_laplace.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/poincare.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/elliptic_grid.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/grid_gen.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/topology_schematic.svg
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/diffStencils.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/memory.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/layout2.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//genindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/coordinates.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//index.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//api_reference.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/index.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/data_types.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/contributing.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/code_layout.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/api_reference.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutpp.html
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/pygments.css
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ /usr/bin/cmake --install build_openmpi
-- Install configuration: "RelWithDebInfo"
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutpp/__init__.py
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libpvode.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libpvode.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libpvpre.so.1.0.0
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libpvpre.so
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/nvector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/vector.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/spgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/smalldense.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/pvbbdpre.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/llnltyps.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/llnlmath.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/iterativ.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvspgmr.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvode.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/cvdiag.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/pvode/band.h
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/PVODE/PVODETargets-relwithdebinfo.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/es/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/de/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/fr/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/zh_CN/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/locale/zh_TW/LC_MESSAGES/libbout.mo
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so.5.0.0
-- Set runtime path of "/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so.5.0.0" to ""
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/libbout++.so
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/stencils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/sourcex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/smoothing.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/parallel_boundary_region.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/parallel_boundary_op.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/optionsreader.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/options_netcdf.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/options.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/multiostream.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/msg_stack.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/mask.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/lapack_routines.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/invert_parderiv.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/invert_laplace.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation_z.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation_xz.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/interpolation.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/initialprofiles.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/gyro_average.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/globals.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/fieldperp.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field_factory.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field_data.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/fft.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/difops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/derivs.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/dcomplex.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/cyclic_reduction.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boutexception.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout_types.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/petsclib.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/invertable_operator.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/utils.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/field.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/sundials_backports.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/boutcomm.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/output.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/where.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vector3d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vector2d.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/vecops.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/unused.hxx
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/include/openmpi-x86_64/bout++/bout/traits.hxx
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-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/bout++ConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/BOUT++functions.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/CorrectWindowsPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindClangFormat.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindFFTW.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindHYPRE.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDF.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindnetCDFCxx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindPackageMultipass.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindLibuuid.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindPETSc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindScoreP.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSLEPc.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSUNDIALS.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/FindSphinx.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/openmpi/lib/cmake/bout++/ResolveCompilerPaths.cmake
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12/site-packages/openmpi/boutconfig/__init__.py
++ grep /libbout
++ find /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so: RUNPATH=:/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0: RUNPATH=/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/openmpi/lib/libbout++.so.5.0.0: new RUNPATH: /usr/lib64/openmpi/lib
+ for f in $(find ${RPM_BUILD_ROOT}/${MPI_LIB} ${RPM_BUILD_ROOT}/${MPI_PYTHON3_SITEARCH} | grep /libbout)
+ chrpath -r /usr/lib64/openmpi/lib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: RUNPATH=:/usr/lib64/openmpi/lib
/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64//usr/lib64/python3.12/site-packages/openmpi/boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib64/openmpi/lib
+ rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/bout++
+ mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/modulefiles/bout++
+ cat
+ DESTDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ /usr/bin/cmake --install build_openmpi/manual
-- Install configuration: "RelWithDebInfo"
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++/
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//objects.inv
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//searchindex.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/init_balloon.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/stagLocations.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/quickstart_conduction_example.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/sod_result.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/interchange_inst_test.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/snb-step.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/snb-sinusoidal.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/par_laplace.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilGlobalIndices.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMatrix.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMeshWithStencil.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/5PointStencilMesh.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/poincare.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/elliptic_grid.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/grid_gen.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/boutmesh-comms.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/topology_schematic.svg
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/topology_cross_section.svg
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/diffStencils.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/fluid_norm_mc.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/petsc_vector_set.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/operator_stencil_uml.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/petsc_interface_overview.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/memory.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/layout2.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_images/layout1.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//search.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//py-modindex.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//genindex.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/variable_init.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/time_integration.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/testing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/staggered_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/running_bout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/quickstart.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/python_boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/python.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/preconditioning.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/physics_models.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/petsc.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/parallel-transforms.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/output_and_post.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/nonlocal.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/new_in_v5.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/makefiles.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/laplacian.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/invertable_operator.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/introduction.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/installing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/input_grids.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/gpu_support.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/eigenvalue_solver.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/differential_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/coordinates.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/bout_functions_for_physics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/boundary_options.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/algebraic_operators.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/advanced_install.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//user_docs/BOUT_Gradperp_op.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//index.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/petsc_interface.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/performance_profiling.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/natural_language.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/mesh.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/git_basics.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/file_io.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/data_types.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/contributing.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//developer_docs/code_layout.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//api_reference.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/variable_init.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/time_integration.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/testing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/staggered_grids.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/running_bout.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/quickstart.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python_boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/python.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/preconditioning.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/physics_models.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/petsc.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/parallel-transforms.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/output_and_post.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/nonlocal.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/new_in_v5.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/makefiles.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/laplacian.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/invertable_operator.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/introduction.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/installing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/input_grids.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/gpu_support.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/eigenvalue_solver.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/differential_operators.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/coordinates.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_options.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/bout_functions_for_physics.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/boundary_options.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/algebraic_operators.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/advanced_install.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/user_docs/BOUT_Gradperp_op.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/index.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/petsc_interface.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/performance_profiling.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/natural_language.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/mesh.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/git_basics.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/file_io.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/data_types.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/contributing.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/developer_docs/code_layout.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/api_reference.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/zoidberg.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boututils.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutpp.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_sources/_apidoc/boutdata.rst.txt
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc/zoidberg.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc/boututils.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutpp.html
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_apidoc/boutdata.html
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/css/custom.css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/contents.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/navigation.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/sphinxdoc.css
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/basic.css
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/doctools.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/documentation_options.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/file.png
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/language_data.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/minus.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/plus.png
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/searchtools.js
-- Up-to-date: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/sphinx_highlight.js
-- Installing: /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++//_static/pygments.css
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64 libbout
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 5.0.0-10.fc40 --unique-debug-suffix -5.0.0-10.fc40.x86_64 --unique-debug-src-base bout++-5.0.0-10.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
find-debuginfo: starting
Extracting debug info from 8 files
DWARF-compressing 8 files
sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/bout++-5.0.0-10.fc40.x86_64
21360 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/lib64/openmpi/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/openmpi/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/openmpi/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-config from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-add-mod-path from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-archive-helper.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-boutdata-restart-create from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-build-deps.sh from /usr/bin/env bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-changelog-generator.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-log-color from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/lib64/mpich/bin/bout-sonnet from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-stop-script from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/lib64/mpich/bin/bout-v5-factory-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-format-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-header-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-input-file-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-macro-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-physics-model-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout-v5-xzinterpolation-upgrader.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_3to4.py from /usr/bin/env python3 to #!/usr/bin/python3
mangling shebang in /usr/lib64/mpich/bin/bout_4to5 from /bin/bash to #!/usr/bin/bash
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib/debug/usr/lib64/python3.12 using python3.12
Bytecompiling .py files below /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/lib64/python3.12 using python3.12
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.DTcOoH
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ fail=0
+ for mpi in mpich openmpi
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/mpich-x86_64
+ eval 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib; export LD_LIBRARY_PATH;
MPI_COMPILER=mpich-x86_64; export MPI_COMPILER;
MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/mpich-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/mpich-x86_64; export MPI_MAN;
MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON_SITEARCH;
_LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/mpich-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich; export MPI_PYTHON3_SITEARCH;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich; export MPI_FORTRAN_MOD_DIR;
MPI_HOME=/usr/lib64/mpich; export MPI_HOME;
__MODULES_LMCONFLICT=mpi/mpich-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SYSCONFIG=/etc/mpich-x86_64; export MPI_SYSCONFIG;
MPI_SUFFIX=_mpich; export MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich; export MPI_PYTHON2_SITEARCH;
MPI_LIB=/usr/lib64/mpich/lib; export MPI_LIB;
PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/mpich/bin; export MPI_BIN;
test 0;'
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ MPI_COMPILER=mpich-x86_64
++ export MPI_COMPILER
++ MANPATH=/usr/share/man/mpich-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/mpich-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/mpich-x86_64
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/mpich-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ __MODULES_LMCONFLICT='mpi/mpich-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SYSCONFIG=/etc/mpich-x86_64
++ export MPI_SYSCONFIG
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ PATH=/usr/lib64/mpich/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer'
+ pushd build_mpich
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j2 build-check
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles 70
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-all.cc
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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[ 42%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx
[ 42%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-wave-1d-y
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx
[ 42%] Linking CXX executable advection
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx
[ 42%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" 
[ 42%] Linking CXX executable cyto
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-diffusion
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
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make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Built target gtest
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
[ 44%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 45%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 45%] Built target MMS-wave-1d
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 48%] Built target boutpp.cpython-312-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test-yupdown-weights
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx
[ 50%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test-backtrace
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp]
    3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix
      |  ^~~~~~~
[ 50%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 50%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 50%] Built target test_beuler
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-bout-override-default-option
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx
[ 51%] Linking CXX executable command-args
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-command-args
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
[ 51%] Linking CXX executable test-communications
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Built target test-communications
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 51%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx
[ 52%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-coordinates-initialization
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx
[ 52%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 52%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-delp2
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Built target test-cyclic
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 52%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx
[ 54%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Built target test-datafile-facade
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx
[ 54%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Built target test-drift-instability
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 54%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx
[ 55%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 55%] Linking CXX executable test_fieldgroupcomm
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Built target test-drift-instability-staggered
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Built target test-fieldgroupComm
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 55%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
[ 57%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 57%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Built target test-griddata
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx
[ 57%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 57%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx
[ 57%] Linking CXX executable test_initial
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 58%] Linking CXX executable test_gyro
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Built target test-initial
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Built target test-gyro
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 58%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx
[ 60%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 60%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 60%] Built target test-interchange-instability
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build.make tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator<T>::setup() [with T = Field3D; PetscErrorCode = int]’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19:   required from here
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
[ 61%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Built target test-interpolate-z
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx
[ 61%] Linking CXX executable invertable_operator
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 61%] Built target test-invertable-operator
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx
[ 62%] Linking CXX executable test_invpar
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Built target test-invpar
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
[ 62%] Linking CXX executable test_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 62%] Built target test-laplace
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx
[ 64%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 64%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 64%] Built target test-laplacexy-fv
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx
[ 65%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 65%] Linking CXX executable test-laplacexz
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Built target test-laplacexy-short
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 65%] Built target test-laplacexz
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx
[ 67%] Linking CXX executable test_multigrid_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 67%] Linking CXX executable test_naulin_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Built target test-multigrid-laplace
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 67%] Built target test-naulin-laplace
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx
[ 68%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Built target test-options-netcdf
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx
[ 68%] Linking CXX executable test_petsc_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 68%] Built target test-petsc-laplace
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx
[ 70%] Linking CXX executable test_petsc_laplace_MAST_grid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 70%] Linking CXX executable test-restart-io
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Built target test-petsc-laplace-MAST-grid
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Built target test-restart-io
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 70%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx
[ 70%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 71%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Built target test-restarting
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 71%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx
[ 71%] Linking CXX executable test_snb
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 72%] Linking CXX executable test_solver
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Built target test-snb
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Built target test-solver
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 72%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx
[ 72%] Linking CXX executable squash
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 74%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Built target test-squash
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Built target test-stopCheck
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 74%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 75%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Built target test-twistshift
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Built target test-stopCheck-file
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx
[ 75%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Built target test-twistshift-staggered
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 75%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx
[ 77%] Linking CXX executable testVec
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Built target test-vec
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Built target build-check-mms-tests
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 77%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/mpich/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc
[ 77%] Linking CXX executable test_yupdown
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/integrated/test-yupdown && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
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[ 77%] Building python interface
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/libboutpp.cpython-312-x86_64-linux-gnu.so /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/libboutpp.cpython-312-x86_64-linux-gnu.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tools/pylib/_boutpp_build/../boutpp/__init__.py
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[ 77%] Built target boutpp
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[ 78%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/mpich/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../../../../lib/libgtest.so.1.10.0 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o
[ 78%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field2d.cxx
[ 80%] Building CXX object tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -MF CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o.d -o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field3d.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/mesh/test_interpolation.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o -MF CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o.d -o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/mesh/test_paralleltransform.cxx
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/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/sys/test_raja.cxx:96:7: warning: multi-line comment [-Wcomment]
   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/test_extras.cxx.o -MF CMakeFiles/serial_tests.dir/test_extras.cxx.o.d -o CMakeFiles/serial_tests.dir/test_extras.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/test_extras.cxx
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit && /usr/lib64/mpich/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/mpich-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -MF CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o.d -o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/src/test_bout++.cxx
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/usr/lib64/mpich/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libpetsc.so /usr/lib64/mpich/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/mpich/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/mpich/lib/libsundials_cvode.so.6.5.1 /usr/lib64/mpich/lib/libsundials_ida.so.6.5.1 /usr/lib64/mpich/lib/libsundials_arkode.so.5.5.1 -ldl 
/usr/bin/ld: /tmp/ccqQY3iy.ltrans106.ltrans.o: in function `testing::internal::TestFactoryImpl<OptionsNetCDFTest_WriteMultipleTimeDimensions_Test>::CreateTest()':
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make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/advection/CMakeFiles/MMS-advection.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 42%] Built target MMS-diffusion
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Built target MMS-wave-1d
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
[ 44%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
    Start 52: MMS-diffusion
1/7 Test #52: MMS-diffusion ....................   Passed    5.31 sec
    Start 53: MMS-wave-1d
2/7 Test #53: MMS-wave-1d ......................   Passed    4.92 sec
    Start 54: MMS-wave-1d-y
3/7 Test #54: MMS-wave-1d-y ....................   Passed    4.86 sec
    Start 55: MMS-bracket
4/7 Test #55: MMS-bracket ......................   Passed    0.49 sec
    Start 56: MMS-derivatives3
5/7 Test #56: MMS-derivatives3 .................   Passed    1.12 sec
    Start 57: MMS-shiftedmetricinterp
6/7 Test #57: MMS-shiftedmetricinterp ..........   Passed    3.97 sec
    Start 58: MMS-upwinding3
7/7 Test #58: MMS-upwinding3 ...................   Passed    1.25 sec

100% tests passed, 0 tests failed out of 7

Total Test time (real) =  21.94 sec
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target check-mms-tests
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target gtest
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target gmock
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'tests/unit/CMakeFiles/serial_tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target serial_tests
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/build-check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/build-check-unit-tests.dir/build.make CMakeFiles/build-check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[3]: Nothing to be done for 'CMakeFiles/build-check-unit-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
Built target build-check-unit-tests
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich/CMakeFiles/check-unit-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make  -f CMakeFiles/check-unit-tests.dir/build.make CMakeFiles/check-unit-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
ctest -R serial_tests --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich
    Start 1: serial_tests
1/1 Test #1: serial_tests .....................***Failed    4.41 sec
Running main() from bout_test_main.cxx

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.

[WARNING] /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-death-test.cc:1121:: Death tests use fork(), which is unsafe particularly in a threaded context. For this test, Google Test detected 3 threads. See https://github.com/google/googletest/blob/master/googletest/docs/advanced.md#death-tests-and-threads for more explanation and suggested solutions, especially if this is the last message you see before your test times out.
Timer::resetTime
Timer name         | Total time (s) | % of top | Hits | Mean time/hit (s)
-------------------|----------------|----------|------|------------------
one                | 0.003176089    | 1.00     | 1    | 0.003176089      
two                | 0.002110948    | 0.66     | 2    | 0.001055474      
18 characters long | 1.2e-07        | 0.00     | 1    | 1.2e-07          
Calculating differential geometry terms
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddx:first = C2 ()
	Option ddx:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
	Option ddz:first = C2 ()
	Option ddz:upwind = C2 ()
	Option ddy:first = C2 ()
	Option ddy:upwind = C2 ()
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:238: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse3D (0 ms)
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/field/test_field.cxx:251: Failure
Expected: getUniform(nonuniform) throws an exception of type BoutException.
  Actual: it throws fmt::v10::format_error with description "argument not found".
[  FAILED  ] FieldTest.GetUniformFalse2D (0 ms)
[==========] 2158 tests from 141 test suites ran. (4063 ms total)
[  PASSED  ] 2156 tests.


0% tests passed, 1 tests failed out of 1

Total Test time (real) =   4.42 sec

The following tests FAILED:
	  1 - serial_tests (Failed)
Errors while running CTest
make[3]: *** [CMakeFiles/check-unit-tests.dir/build.make:73: CMakeFiles/check-unit-tests] Error 8
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[2]: *** [CMakeFiles/Makefile2:2743: CMakeFiles/check-unit-tests.dir/all] Error 2
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_mpich'
make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2
make: *** [Makefile:286: check] Error 2
++ exit 0
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
+ popd
+ '[' mpich = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/mpich/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/mpich/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/mpich/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/mpich-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/mpich-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/mpich-x86_64
+ eval 'unset LD_LIBRARY_PATH;
unset MPI_COMPILER;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset MPI_PYTHON_SITEARCH;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_FORTRAN_MOD_DIR;
unset MPI_HOME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SYSCONFIG;
unset MPI_SUFFIX;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_PYTHON2_SITEARCH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset LD_LIBRARY_PATH
++ unset MPI_COMPILER
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SYSCONFIG
++ unset MPI_SUFFIX
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ for mpi in mpich openmpi
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n 'LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
LOADEDMODULES=; export LOADEDMODULES;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ LOADEDMODULES=
++++ export LOADEDMODULES
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module load mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw load mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh load mpi/openmpi-x86_64
+ eval 'MPI_COMPILER=openmpi-x86_64; export MPI_COMPILER;
LD_LIBRARY_PATH=/usr/lib64/openmpi/lib; export LD_LIBRARY_PATH;
MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:; export MANPATH;
MPI_INCLUDE=/usr/include/openmpi-x86_64; export MPI_INCLUDE;
MPI_MAN=/usr/share/man/openmpi-x86_64; export MPI_MAN;
_LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64; export _LMFILES_;
LOADEDMODULES=mpi/openmpi-x86_64; export LOADEDMODULES;
PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi; export MPI_PYTHON3_SITEARCH;
MPI_HOME=/usr/lib64/openmpi; export MPI_HOME;
MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi; export MPI_FORTRAN_MOD_DIR;
__MODULES_LMALTNAME=mpi/openmpi-x86_64\&as\|mpi/default\&as\|mpi/latest; export __MODULES_LMALTNAME;
__MODULES_LMCONFLICT=mpi/openmpi-x86_64\&mpi; export __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:2; export __MODULES_SHARE_MANPATH;
MPI_SUFFIX=_openmpi; export MPI_SUFFIX;
MPI_SYSCONFIG=/etc/openmpi-x86_64; export MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
MPI_LIB=/usr/lib64/openmpi/lib; export MPI_LIB;
PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
MPI_BIN=/usr/lib64/openmpi/bin; export MPI_BIN;
test 0;'
++ MPI_COMPILER=openmpi-x86_64
++ export MPI_COMPILER
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ MANPATH=/usr/share/man/openmpi-x86_64:/usr/share/man:
++ export MANPATH
++ MPI_INCLUDE=/usr/include/openmpi-x86_64
++ export MPI_INCLUDE
++ MPI_MAN=/usr/share/man/openmpi-x86_64
++ export MPI_MAN
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-x86_64
++ export _LMFILES_
++ LOADEDMODULES=mpi/openmpi-x86_64
++ export LOADEDMODULES
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.12/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ __MODULES_LMALTNAME='mpi/openmpi-x86_64&as|mpi/default&as|mpi/latest'
++ export __MODULES_LMALTNAME
++ __MODULES_LMCONFLICT='mpi/openmpi-x86_64&mpi'
++ export __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:2
++ export __MODULES_SHARE_MANPATH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-x86_64
++ export MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi ~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ PATH=/usr/lib64/openmpi/bin:/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ export OMPI_MCA_rmaps_base_oversubscribe=1
+ OMPI_MCA_rmaps_base_oversubscribe=1
+ pushd build_openmpi
+ export OMPI_MCA_rmaps_base_oversubscribe=yes
+ OMPI_MCA_rmaps_base_oversubscribe=yes
+ export HDF5_USE_FILE_LOCKING=FALSE
+ HDF5_USE_FILE_LOCKING=FALSE
+ export BOUT_TEST_TIMEOUT=15m
+ BOUT_TEST_TIMEOUT=15m
+ sed 's/ 3s / 30s /' tests/integrated/test-coordinates-initialization/runtest
#!/bin/bash

# Cores: 3

make || exit

test -z $MPIRUN  && MPIRUN='mpirun -np'
# Kill the test after 3 seconds, if it hasn't already exited
OMP_NUM_THREADS=1 $MPIRUN 3 timeout 30s ./test-coordinates-initialization

e=$?

if test $e -ne 0
then
    echo "The test failed. That can be caused by a timeout."
    echo "If this test is run on high load, it may fail occasionally."
    echo "The load is:"
    uptime
fi

exit $e
+ make -j2 build-check
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 build-check
make[1]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
/usr/bin/cmake -S/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea -B/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles 70
make  -f CMakeFiles/Makefile2 CMakeFiles/build-check.dir/all
make[2]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f externalpackages/PVODE/CMakeFiles/pvpre.dir/build.make externalpackages/PVODE/CMakeFiles/pvpre.dir/depend
make  -f externalpackages/PVODE/CMakeFiles/pvode.dir/build.make externalpackages/PVODE/CMakeFiles/pvode.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvpre.dir/DependInfo.cmake "--color="
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/externalpackages/PVODE/CMakeFiles/pvode.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvpre.dir/build'.
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'externalpackages/PVODE/CMakeFiles/pvode.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  0%] Built target pvpre
make  -f tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/build.make tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/DependInfo.cmake "--color="
[  2%] Built target pvode
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/bout++.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[  2%] Building CXX object tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgtest_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o -MF CMakeFiles/gtest.dir/src/gtest-all.cc.o.d -o CMakeFiles/gtest.dir/src/gtest-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/src/gtest-all.cc
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/bout++.dir/build.make CMakeFiles/bout++.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/bout++.dir/build'.
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[ 42%] Built target bout++
make  -f tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/build.make tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d-y/CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d-y/wave.cxx
[ 42%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d-y.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d-y.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target MMS-wave-1d-y
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection/CMakeFiles/MMS-advection.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/advection/CMakeFiles/MMS-advection.dir/build.make tests/MMS/advection/CMakeFiles/MMS-advection.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/advection/CMakeFiles/MMS-advection.dir/advection.cxx.o -MF CMakeFiles/MMS-advection.dir/advection.cxx.o.d -o CMakeFiles/MMS-advection.dir/advection.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/advection/advection.cxx
[ 42%] Linking CXX executable advection
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/advection && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-advection.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-advection.dir/advection.cxx.o" -o advection  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 42%] Linking CXX shared library ../../../../../lib/libgtest.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_link_script CMakeFiles/gtest.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgtest.so.1.10.0 -o ../../../../../lib/libgtest.so.1.10.0 "CMakeFiles/gtest.dir/src/gtest-all.cc.o" 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target MMS-advection
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build.make tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Building CXX object tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/diffusion/CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -MF CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o.d -o CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/diffusion/diffusion.cxx
[ 42%] Linking CXX executable cyto
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-diffusion.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-diffusion.dir/diffusion.cxx.o" -o cyto  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googletest && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so.1.10.0 ../../../../../lib/libgtest.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 42%] Built target gtest
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build.make tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Building CXX object tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/MMS/wave-1d/CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -MF CMakeFiles/MMS-wave-1d.dir/wave.cxx.o.d -o CMakeFiles/MMS-wave-1d.dir/wave.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/MMS/wave-1d/wave.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Built target MMS-diffusion
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build.make tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Building CXX object tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/lib64/openmpi/bin/mpicxx -DGTEST_CREATE_SHARED_LIBRARY=1 -DGTEST_HAS_PTHREAD=0 -Dgmock_EXPORTS -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -fPIC -Wall -Wshadow -Werror -Wno-error=dangling-else -DGTEST_HAS_PTHREAD=0 -fexceptions -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -MD -MT tests/unit/externalpackages/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o -MF CMakeFiles/gmock.dir/src/gmock-all.cc.o.d -o CMakeFiles/gmock.dir/src/gmock-all.cc.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/src/gmock-all.cc
[ 45%] Linking CXX shared library ../../../../../lib/libgmock.so
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmock.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libgmock.so.1.10.0 -o ../../../../../lib/libgmock.so.1.10.0 "CMakeFiles/gmock.dir/src/gmock-all.cc.o"  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../../../lib/libgtest.so.1.10.0 
[ 45%] Linking CXX executable wave
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMS-wave-1d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/MMS-wave-1d.dir/wave.cxx.o" -o wave  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/externalpackages/googletest/googlemock && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so.1.10.0 ../../../../../lib/libgmock.so
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 45%] Built target gmock
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build.make tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 45%] Building CXX object tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown-weights/CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -MF CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o.d -o CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown-weights/test_yupdown_weights.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 45%] Built target MMS-wave-1d
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build.make tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'tools/pylib/_boutpp_build/CMakeFiles/boutpp.cpython-312-x86_64-linux-gnu.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 48%] Built target boutpp.cpython-312-x86_64-linux-gnu
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build.make tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 50%] Building CXX object tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-backtrace/CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -MF CMakeFiles/test-backtrace.dir/boutexcept.cxx.o.d -o CMakeFiles/test-backtrace.dir/boutexcept.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-backtrace/boutexcept.cxx
[ 50%] Linking CXX executable boutexcept
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-backtrace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-backtrace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-backtrace.dir/boutexcept.cxx.o" -o boutexcept  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 50%] Built target test-backtrace
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build.make tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 50%] Building CXX object tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-beuler/CMakeFiles/test_beuler.dir/test_beuler.cxx.o -MF CMakeFiles/test_beuler.dir/test_beuler.cxx.o.d -o CMakeFiles/test_beuler.dir/test_beuler.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-beuler/test_beuler.cxx
[ 51%] Linking CXX executable test_yupdown_weights
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown-weights && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-yupdown-weights.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown-weights.dir/test_yupdown_weights.cxx.o" -o test_yupdown_weights  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Built target test-yupdown-weights
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build.make tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Building CXX object tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-bout-override-default-option/CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -MF CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o.d -o CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-bout-override-default-option/test-bout-override-default-option.cxx:1:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/options.hxx:3:2: warning: #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix [-Wcpp]
    3 | #warning Header "options.hxx" has moved to "bout/options.hxx". Run `bin/bout-v5-header-upgrader.py` to fix
      |  ^~~~~~~
[ 51%] Linking CXX executable test_beuler
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-beuler && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_beuler.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/test_beuler.dir/test_beuler.cxx.o -o test_beuler  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 51%] Built target test_beuler
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build.make tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-command-args/CMakeFiles/test-command-args.dir/command-args.cxx.o -MF CMakeFiles/test-command-args.dir/command-args.cxx.o.d -o CMakeFiles/test-command-args.dir/command-args.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-command-args/command-args.cxx
[ 52%] Linking CXX executable test-bout-override-default-option
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-bout-override-default-option && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-bout-override-default-option.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-bout-override-default-option.dir/test-bout-override-default-option.cxx.o" -o test-bout-override-default-option  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Built target test-bout-override-default-option
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications/CMakeFiles/test-communications.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-communications/CMakeFiles/test-communications.dir/build.make tests/integrated/test-communications/CMakeFiles/test-communications.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-communications/CMakeFiles/test-communications.dir/test-communications.cxx.o -MF CMakeFiles/test-communications.dir/test-communications.cxx.o.d -o CMakeFiles/test-communications.dir/test-communications.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-communications/test-communications.cxx
[ 52%] Linking CXX executable command-args
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-command-args && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-command-args.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-command-args.dir/command-args.cxx.o" -o command-args  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Built target test-command-args
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build.make tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 52%] Building CXX object tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-coordinates-initialization/CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -MF CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o.d -o CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-coordinates-initialization/test-coordinates-initialization.cxx
[ 52%] Linking CXX executable test-communications
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-communications && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-communications.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-communications.dir/test-communications.cxx.o" -o test-communications  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 54%] Linking CXX executable test-coordinates-initialization
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-coordinates-initialization && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-coordinates-initialization.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-coordinates-initialization.dir/test-coordinates-initialization.cxx.o" -o test-coordinates-initialization  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-coordinates-initialization
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build.make tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-cyclic/CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -MF CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o.d -o CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-cyclic/test_cyclic.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-communications
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build.make tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-delp2/CMakeFiles/test-delp2.dir/test_delp2.cxx.o -MF CMakeFiles/test-delp2.dir/test_delp2.cxx.o.d -o CMakeFiles/test-delp2.dir/test_delp2.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-delp2/test_delp2.cxx
[ 54%] Linking CXX executable test_cyclic
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-cyclic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-cyclic.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-cyclic.dir/test_cyclic.cxx.o" -o test_cyclic  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 54%] Linking CXX executable test_delp2
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-delp2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-delp2.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-delp2.dir/test_delp2.cxx.o" -o test_delp2  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-delp2
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build.make tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-datafilefacade/CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -MF CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o.d -o CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-datafilefacade/test-datafile-facade.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Built target test-cyclic
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build.make tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 54%] Building CXX object tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability/CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability/2fluid.cxx
[ 55%] Linking CXX executable test-datafile-facade
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-datafilefacade && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-datafile-facade.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-datafile-facade.dir/test-datafile-facade.cxx.o" -o test-datafile-facade  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Built target test-datafile-facade
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build.make tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Building CXX object tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-drift-instability-staggered/CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -MF CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o.d -o CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-drift-instability-staggered/2fluid.cxx
[ 55%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Built target test-drift-instability
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build.make tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 55%] Building CXX object tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-fieldgroupComm/CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -MF CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o.d -o CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-fieldgroupComm/test_fieldgroupcomm.cxx
[ 57%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-drift-instability-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-drift-instability-staggered.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-drift-instability-staggered.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 57%] Linking CXX executable test_fieldgroupcomm
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-fieldgroupComm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-fieldgroupComm.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-fieldgroupComm.dir/test_fieldgroupcomm.cxx.o" -o test_fieldgroupcomm  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Built target test-drift-instability-staggered
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build.make tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata/CMakeFiles/test-griddata.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata/test_griddata.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Built target test-fieldgroupComm
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build.make tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 57%] Building CXX object tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-griddata-yboundary-guards/CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -MF CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o.d -o CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-griddata-yboundary-guards/test_griddata.cxx
[ 58%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 58%] Linking CXX executable test_griddata
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-griddata-yboundary-guards && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-griddata-yboundary-guards.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-griddata-yboundary-guards.dir/test_griddata.cxx.o" -o test_griddata  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Built target test-griddata
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build.make tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Building CXX object tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-gyro/CMakeFiles/test-gyro.dir/test_gyro.cxx.o -MF CMakeFiles/test-gyro.dir/test_gyro.cxx.o.d -o CMakeFiles/test-gyro.dir/test_gyro.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-gyro/test_gyro.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Built target test-griddata-yboundary-guards
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial/CMakeFiles/test-initial.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-initial/CMakeFiles/test-initial.dir/build.make tests/integrated/test-initial/CMakeFiles/test-initial.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 58%] Building CXX object tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-initial/CMakeFiles/test-initial.dir/test_initial.cxx.o -MF CMakeFiles/test-initial.dir/test_initial.cxx.o.d -o CMakeFiles/test-initial.dir/test_initial.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-initial/test_initial.cxx
[ 58%] Linking CXX executable test_initial
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-initial && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-initial.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-initial.dir/test_initial.cxx.o" -o test_initial  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 60%] Linking CXX executable test_gyro
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-gyro && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-gyro.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-gyro.dir/test_gyro.cxx.o" -o test_gyro  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Built target test-initial
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build.make tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interchange-instability/CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -MF CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o.d -o CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interchange-instability/2fluid.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Built target test-gyro
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build.make tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 60%] Building CXX object tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate/CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate/test_interpolate.cxx
[ 61%] Linking CXX executable 2fluid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interchange-instability && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interchange-instability.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interchange-instability.dir/2fluid.cxx.o" -o 2fluid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 61%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 61%] Built target test-interpolate
make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/DependInfo.cmake "--color="
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make  -f tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build.make tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 61%] Building CXX object tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-interpolate-z/CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -MF CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o.d -o CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-interpolate-z/test_interpolate.cxx
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[ 61%] Built target test-interchange-instability
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
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make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Building CXX object tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invertable-operator/CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -MF CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o.d -o CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:4:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx: In instantiation of ‘PetscErrorCode bout::inversion::InvertableOperator<T>::setup() [with T = Field3D; PetscErrorCode = int]’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invertable-operator/invertable_operator.cxx:51:19:   required from here
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
In file included from /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:44:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:222:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  222 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:225:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  225 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:231:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  231 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:30: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |             ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:262:52: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  262 |         if (localmesh->firstY() or localmesh->lastY()) {
      |                                    ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:265:36: warning: ‘virtual bool Mesh::firstY() const’ is deprecated: Please use firstY(xind) instead [-Wdeprecated-declarations]
  265 |               if (localmesh->firstY()) {
      |                   ~~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:441:66: note: declared here
  441 |   [[deprecated("Please use firstY(xind) instead")]] virtual bool firstY() const = 0;
      |                                                                  ^~~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/invertable_operator.hxx:270:35: warning: ‘virtual bool Mesh::lastY() const’ is deprecated: Please use lastY(xind) instead [-Wdeprecated-declarations]
  270 |               if (localmesh->lastY()) {
      |                   ~~~~~~~~~~~~~~~~^~
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include/bout/mesh.hxx:445:65: note: declared here
  445 |   [[deprecated("Please use lastY(xind) instead")]] virtual bool lastY() const = 0;
      |                                                                 ^~~~~
[ 62%] Linking CXX executable test_interpolate
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-interpolate-z && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-interpolate-z.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-interpolate-z.dir/test_interpolate.cxx.o" -o test_interpolate  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 62%] Linking CXX executable invertable_operator
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invertable-operator && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invertable-operator.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invertable-operator.dir/invertable_operator.cxx.o" -o invertable_operator  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Built target test-interpolate-z
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build.make tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Building CXX object tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-invpar/CMakeFiles/test-invpar.dir/test_invpar.cxx.o -MF CMakeFiles/test-invpar.dir/test_invpar.cxx.o.d -o CMakeFiles/test-invpar.dir/test_invpar.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-invpar/test_invpar.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 62%] Built target test-invertable-operator
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build.make tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Building CXX object tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace/CMakeFiles/test-laplace.dir/test_laplace.cxx.o -MF CMakeFiles/test-laplace.dir/test_laplace.cxx.o.d -o CMakeFiles/test-laplace.dir/test_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace/test_laplace.cxx
[ 64%] Linking CXX executable test_invpar
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-invpar && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-invpar.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-invpar.dir/test_invpar.cxx.o" -o test_invpar  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Built target test-invpar
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build.make tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Building CXX object tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplace-petsc3d/CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -MF CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o.d -o CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplace-petsc3d/test-laplace3d.cxx
[ 64%] Linking CXX executable test_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace.dir/test_laplace.cxx.o" -o test_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 64%] Built target test-laplace
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build.make tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Building CXX object tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-fv/CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-fv/test-laplacexy.cxx
[ 65%] Linking CXX executable test-laplace3d
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplace-petsc3d && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplace-petsc3d.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplace-petsc3d.dir/test-laplace3d.cxx.o" -o test-laplace3d  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 65%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-fv && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-fv.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-fv.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Built target test-laplace-petsc3d
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build.make tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Building CXX object tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexy-short/CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -MF CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o.d -o CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexy-short/test-laplacexy.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 65%] Built target test-laplacexy-fv
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build.make tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Building CXX object tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-laplacexz/CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -MF CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o.d -o CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-laplacexz/test-laplacexz.cxx
[ 67%] Linking CXX executable test-laplacexy
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexy-short && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexy-short.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexy-short.dir/test-laplacexy.cxx.o" -o test-laplacexy  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 67%] Linking CXX executable test-laplacexz
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-laplacexz && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-laplacexz.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-laplacexz.dir/test-laplacexz.cxx.o" -o test-laplacexz  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Built target test-laplacexy-short
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build.make tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Building CXX object tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-multigrid_laplace/CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -MF CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o.d -o CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-multigrid_laplace/test_multigrid_laplace.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 67%] Built target test-laplacexz
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build.make tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-naulin-laplace/CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -MF CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o.d -o CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-naulin-laplace/test_naulin_laplace.cxx
[ 68%] Linking CXX executable test_multigrid_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-multigrid_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-multigrid-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-multigrid-laplace.dir/test_multigrid_laplace.cxx.o" -o test_multigrid_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 68%] Linking CXX executable test_naulin_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-naulin-laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-naulin-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-naulin-laplace.dir/test_naulin_laplace.cxx.o" -o test_naulin_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Built target test-naulin-laplace
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build.make tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Building CXX object tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-options-netcdf/CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -MF CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o.d -o CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-options-netcdf/test-options-netcdf.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 68%] Built target test-multigrid-laplace
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build.make tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Building CXX object tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace/CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -MF CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o.d -o CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace/test_petsc_laplace.cxx
[ 70%] Linking CXX executable test-options-netcdf
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-options-netcdf && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-options-netcdf.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-options-netcdf.dir/test-options-netcdf.cxx.o" -o test-options-netcdf  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Built target test-options-netcdf
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build.make tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Building CXX object tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-petsc_laplace_MAST-grid/CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -MF CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o.d -o CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-petsc_laplace_MAST-grid/test_petsc_laplace_MAST_grid.cxx
[ 70%] Linking CXX executable test_petsc_laplace
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace.dir/test_petsc_laplace.cxx.o" -o test_petsc_laplace  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 70%] Built target test-petsc-laplace
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build.make tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restart-io/CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -MF CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o.d -o CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restart-io/test-restart-io.cxx
[ 71%] Linking CXX executable test_petsc_laplace_MAST_grid
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-petsc_laplace_MAST-grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-petsc-laplace-MAST-grid.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-petsc-laplace-MAST-grid.dir/test_petsc_laplace_MAST_grid.cxx.o" -o test_petsc_laplace_MAST_grid  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 71%] Linking CXX executable test-restart-io
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restart-io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restart-io.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restart-io.dir/test-restart-io.cxx.o" -o test-restart-io  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Built target test-petsc-laplace-MAST-grid
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build.make tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-restarting/CMakeFiles/test-restarting.dir/test_restarting.cxx.o -MF CMakeFiles/test-restarting.dir/test_restarting.cxx.o.d -o CMakeFiles/test-restarting.dir/test_restarting.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-restarting/test_restarting.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Built target test-restart-io
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build.make tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 71%] Building CXX object tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-smooth/CMakeFiles/test-smooth.dir/test_smooth.cxx.o -MF CMakeFiles/test-smooth.dir/test_smooth.cxx.o.d -o CMakeFiles/test-smooth.dir/test_smooth.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-smooth/test_smooth.cxx
[ 71%] Linking CXX executable test_restarting
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-restarting && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-restarting.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-restarting.dir/test_restarting.cxx.o" -o test_restarting  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 72%] Linking CXX executable test_smooth
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-smooth && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-smooth.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-smooth.dir/test_smooth.cxx.o" -o test_smooth  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Built target test-restarting
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb/CMakeFiles/test-snb.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-snb/CMakeFiles/test-snb.dir/build.make tests/integrated/test-snb/CMakeFiles/test-snb.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-snb/CMakeFiles/test-snb.dir/test_snb.cxx.o -MF CMakeFiles/test-snb.dir/test_snb.cxx.o.d -o CMakeFiles/test-snb.dir/test_snb.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-snb/test_snb.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Built target test-smooth
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver/CMakeFiles/test-solver.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-solver/CMakeFiles/test-solver.dir/build.make tests/integrated/test-solver/CMakeFiles/test-solver.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 72%] Building CXX object tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-solver/CMakeFiles/test-solver.dir/test_solver.cxx.o -MF CMakeFiles/test-solver.dir/test_solver.cxx.o.d -o CMakeFiles/test-solver.dir/test_solver.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-solver/test_solver.cxx
[ 72%] Linking CXX executable test_snb
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-snb && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-snb.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-snb.dir/test_snb.cxx.o" -o test_snb  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 74%] Linking CXX executable test_solver
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-solver && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-solver.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-solver.dir/test_solver.cxx.o" -o test_solver  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Built target test-snb
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash/CMakeFiles/test-squash.dir/DependInfo.cmake "--color="
[ 74%] Built target test-solver
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-squash/CMakeFiles/test-squash.dir/build.make tests/integrated/test-squash/CMakeFiles/test-squash.dir/build
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build.make tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 74%] Building CXX object tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck/CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck/test_stopCheck.cxx
[ 74%] Building CXX object tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-squash/CMakeFiles/test-squash.dir/squash.cxx.o -MF CMakeFiles/test-squash.dir/squash.cxx.o.d -o CMakeFiles/test-squash.dir/squash.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-squash/squash.cxx
[ 75%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
[ 75%] Linking CXX executable squash
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-squash && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-squash.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-squash.dir/squash.cxx.o" -o squash  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Built target test-stopCheck
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build.make tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Building CXX object tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-stopCheck-file/CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -MF CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o.d -o CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-stopCheck-file/test_stopCheck.cxx
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Built target test-squash
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build.make tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 75%] Building CXX object tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift/CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift/test-twistshift.cxx
[ 77%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-twistshift
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build.make tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-twistshift-staggered/CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -MF CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o.d -o CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-twistshift-staggered/test-twistshift.cxx
[ 77%] Linking CXX executable test_stopCheck
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-stopCheck-file && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-stopCheck-file.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-stopCheck-file.dir/test_stopCheck.cxx.o" -o test_stopCheck  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-stopCheck-file
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec/CMakeFiles/test-vec.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-vec/CMakeFiles/test-vec.dir/build.make tests/integrated/test-vec/CMakeFiles/test-vec.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-vec/CMakeFiles/test-vec.dir/testVec.cxx.o -MF CMakeFiles/test-vec.dir/testVec.cxx.o.d -o CMakeFiles/test-vec.dir/testVec.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-vec/testVec.cxx
[ 77%] Linking CXX executable test-twistshift
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-twistshift-staggered && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-twistshift-staggered.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-twistshift-staggered.dir/test-twistshift.cxx.o" -o test-twistshift  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Built target test-twistshift-staggered
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build.make tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 77%] Building CXX object tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-yupdown && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/integrated/test-yupdown/CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -MF CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o.d -o CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/integrated/test-yupdown/test_yupdown.cxx
[ 78%] Linking CXX executable testVec
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/integrated/test-vec && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-vec.dir/link.txt --verbose=1
/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-vec.dir/testVec.cxx.o" -o testVec  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 78%] Built target test-vec
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 78%] Built target build-check-mms-tests
make  -f tests/unit/CMakeFiles/serial_tests.dir/build.make tests/unit/CMakeFiles/serial_tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/CMakeFiles/serial_tests.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit && /usr/lib64/openmpi/bin/mpicxx -DCHECK=2 -DFMT_SHARED -DGTEST_HAS_PTHREAD=0 -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout++ -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/unit/../../include -I//include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/include -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include/pvode -I/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/PVODE/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googletest -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock/include -isystem /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/externalpackages/googletest/googlemock -isystem /usr/include/openmpi-x86_64/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -MD -MT tests/unit/CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -MF CMakeFiles/serial_tests.dir/bout_test_main.cxx.o.d -o CMakeFiles/serial_tests.dir/bout_test_main.cxx.o -c /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx
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/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes "CMakeFiles/test-yupdown.dir/test_yupdown.cxx.o" -o test_yupdown  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../../lib/libbout++.so.5.0.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../../lib/libpvode.so.1.0.0 ../../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx: In function ‘int main(int, char**)’:
/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tests/unit/bout_test_main.cxx:29:18: warning: unused variable ‘hyprelib’ [-Wunused-variable]
   29 |   bout::HypreLib hyprelib{};
      |                  ^~~~~~~~
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cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build && /usr/bin/cmake -E copy /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/tools/pylib/_boutpp_build/boutpp.py /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tools/pylib/_boutpp_build/../boutpp/__init__.py
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   96 | #if 0 // disable temporarily until reconcile iteration space for parallel_forall  under \
      |       ^
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/usr/lib64/openmpi/bin/mpicxx -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O2 -g -DNDEBUG -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/serial_tests.dir/bout_test_main.cxx.o CMakeFiles/serial_tests.dir/field/test_field.cxx.o CMakeFiles/serial_tests.dir/field/test_field2d.cxx.o CMakeFiles/serial_tests.dir/field/test_field3d.cxx.o CMakeFiles/serial_tests.dir/field/test_field_factory.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldgroup.cxx.o CMakeFiles/serial_tests.dir/field/test_fieldperp.cxx.o CMakeFiles/serial_tests.dir/field/test_initialprofiles.cxx.o CMakeFiles/serial_tests.dir/field/test_vector2d.cxx.o CMakeFiles/serial_tests.dir/field/test_vector3d.cxx.o CMakeFiles/serial_tests.dir/field/test_where.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_array.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_assert.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_bout_enum_class.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_deriv_store.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_generic_factory.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_macro_for_each.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_monitor.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_indexer.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_matrix.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_setters.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_petsc_vector.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_region.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_single_index_ops.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_stencil.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_template_combinations.cxx.o CMakeFiles/serial_tests.dir/include/bout/test_traits.cxx.o CMakeFiles/serial_tests.dir/include/test_cyclic_reduction.cxx.o CMakeFiles/serial_tests.dir/include/test_derivs.cxx.o CMakeFiles/serial_tests.dir/include/test_mask.cxx.o CMakeFiles/serial_tests.dir/invert/test_fft.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_petsc3damg.cxx.o CMakeFiles/serial_tests.dir/invert/laplace/test_laplace_cyclic.cxx.o CMakeFiles/serial_tests.dir/mesh/data/test_gridfromoptions.cxx.o CMakeFiles/serial_tests.dir/mesh/parallel/test_shiftedmetric.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boundary_factory.cxx.o CMakeFiles/serial_tests.dir/mesh/test_boutmesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates.cxx.o CMakeFiles/serial_tests.dir/mesh/test_coordinates_accessor.cxx.o CMakeFiles/serial_tests.dir/mesh/test_interpolation.cxx.o CMakeFiles/serial_tests.dir/mesh/test_mesh.cxx.o CMakeFiles/serial_tests.dir/mesh/test_paralleltransform.cxx.o CMakeFiles/serial_tests.dir/solver/test_fakesolver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solver.cxx.o CMakeFiles/serial_tests.dir/solver/test_solverfactory.cxx.o CMakeFiles/serial_tests.dir/sys/test_boutexception.cxx.o CMakeFiles/serial_tests.dir/sys/test_expressionparser.cxx.o CMakeFiles/serial_tests.dir/sys/test_msg_stack.cxx.o CMakeFiles/serial_tests.dir/sys/test_options.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_fields.cxx.o CMakeFiles/serial_tests.dir/sys/test_options_netcdf.cxx.o CMakeFiles/serial_tests.dir/sys/test_optionsreader.cxx.o CMakeFiles/serial_tests.dir/sys/test_output.cxx.o CMakeFiles/serial_tests.dir/sys/test_range.cxx.o CMakeFiles/serial_tests.dir/sys/test_timer.cxx.o CMakeFiles/serial_tests.dir/sys/test_type_name.cxx.o CMakeFiles/serial_tests.dir/sys/test_utils.cxx.o CMakeFiles/serial_tests.dir/sys/test_variant.cxx.o CMakeFiles/serial_tests.dir/sys/test_raja.cxx.o CMakeFiles/serial_tests.dir/test_extras.cxx.o CMakeFiles/serial_tests.dir/src/test_bout++.cxx.o -o serial_tests  -Wl,-rpath,/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/lib ../../lib/libgmock.so.1.10.0 ../../lib/libbout++.so.5.0.0 ../../lib/libgtest.so.1.10.0 /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libpetsc.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libfmt.so.10.0.0 ../../lib/libpvode.so.1.0.0 ../../lib/libpvpre.so.1.0.0 /usr/lib64/libnetcdf_c++4.so /usr/lib64/libnetcdf.so /usr/lib64/libfftw3.so /usr/lib64/libflexiblas.so -lm -ldl /usr/lib64/openmpi/lib/libsundials_nvecparallel.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_cvode.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_ida.so.6.5.1 /usr/lib64/openmpi/lib/libsundials_arkode.so.5.5.1 -ldl 
/usr/bin/ld: /tmp/ccoTY0eO.ltrans106.ltrans.o: in function `testing::internal::TestFactoryImpl<OptionsNetCDFTest_WriteMultipleTimeDimensions_Test>::CreateTest()':
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make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/build-check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/build-check-mms-tests.dir/build.make CMakeFiles/build-check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[3]: Nothing to be done for 'CMakeFiles/build-check-mms-tests.dir/build'.
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
[ 44%] Built target build-check-mms-tests
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/depend
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
cd /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/CMakeFiles/check-mms-tests.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make  -f CMakeFiles/check-mms-tests.dir/build.make CMakeFiles/check-mms-tests.dir/build
make[3]: Entering directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
ctest -R MMS- --output-on-failure
Test project /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi
    Start 52: MMS-diffusion
1/7 Test #52: MMS-diffusion ....................***Failed    0.39 sec
rm: cannot remove 'data/BOUT.dmp.*.nc': No such file or directory
Making MMS diffusion test
Running with mesh:nx=4 nout=1 timestep=0.1
getmpirun: using the default mpirun -np
Traceback (most recent call last):
  File "/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/diffusion/runtest", line 43, in <module>
    s, out = launch_safe(cmd, nproc=nproc, pipe=True)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/lib/python3.12/site-packages/boututils/run_wrapper.py", line 291, in launch_safe
    raise RuntimeError(
RuntimeError: Run failed with 1.
Command was:
./cyto mesh:nx=4 nout=1 timestep=0.1

Output was

[e4a47fb9ae614601b0925be682b4757c:28268] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28268] [[11086,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------


    Start 53: MMS-wave-1d
2/7 Test #53: MMS-wave-1d ......................***Failed    0.42 sec
rm: cannot remove 'data/BOUT.dmp.*.nc': No such file or directory
Making Making MMS wave test
Running with mesh:nx=8 nout=1 timestep=0.1
getmpirun: using the default mpirun -np
Traceback (most recent call last):
  File "/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d/runtest", line 43, in <module>
    s, out = launch_safe(cmd, nproc=nproc, pipe=True)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/lib/python3.12/site-packages/boututils/run_wrapper.py", line 291, in launch_safe
    raise RuntimeError(
RuntimeError: Run failed with 1.
Command was:
./wave mesh:nx=8 nout=1 timestep=0.1

Output was

[e4a47fb9ae614601b0925be682b4757c:28294] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28294] [[11172,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------


    Start 54: MMS-wave-1d-y
3/7 Test #54: MMS-wave-1d-y ....................***Failed    0.50 sec
rm: cannot remove 'data/BOUT.dmp.*.nc': No such file or directory
Making Making MMS wave test
Running with mesh:ny=8 mesh:dy=0.7853981633974483 nout=1 timestep=1
getmpirun: using the default mpirun -np
Traceback (most recent call last):
  File "/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi/tests/MMS/wave-1d-y/runtest", line 65, in <module>
    s, out = launch_safe(cmd, nproc=nproc, pipe=True)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/lib/python3.12/site-packages/boututils/run_wrapper.py", line 291, in launch_safe
    raise RuntimeError(
RuntimeError: Run failed with 1.
Command was:
./wave mesh:ny=8 mesh:dy=0.7853981633974483 nout=1 timestep=1

Output was

[e4a47fb9ae614601b0925be682b4757c:28320] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28320] [[11138,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------


    Start 55: MMS-bracket
4/7 Test #55: MMS-bracket ......................***Failed    0.15 sec
[e4a47fb9ae614601b0925be682b4757c:28322] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28322] [[11136,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
[e4a47fb9ae614601b0925be682b4757c:28321] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 716
[e4a47fb9ae614601b0925be682b4757c:28321] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 172
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_init failed
  --> Returned value Unable to start a daemon on the local node (-127) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems.  This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):

  ompi_mpi_init: ompi_rte_init failed
  --> Returned "Unable to start a daemon on the local node" (-127) instead of "Success" (0)
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
***    and potentially your MPI job)
[e4a47fb9ae614601b0925be682b4757c:28321] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!

    Start 56: MMS-derivatives3
5/7 Test #56: MMS-derivatives3 .................***Failed    0.20 sec
[e4a47fb9ae614601b0925be682b4757c:28324] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28324] [[11142,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
[e4a47fb9ae614601b0925be682b4757c:28323] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 716
[e4a47fb9ae614601b0925be682b4757c:28323] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 172
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_init failed
  --> Returned value Unable to start a daemon on the local node (-127) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems.  This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):

  ompi_mpi_init: ompi_rte_init failed
  --> Returned "Unable to start a daemon on the local node" (-127) instead of "Success" (0)
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
***    and potentially your MPI job)
[e4a47fb9ae614601b0925be682b4757c:28323] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!

    Start 57: MMS-shiftedmetricinterp
6/7 Test #57: MMS-shiftedmetricinterp ..........***Failed    0.25 sec
[e4a47fb9ae614601b0925be682b4757c:28326] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28326] [[11140,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
[e4a47fb9ae614601b0925be682b4757c:28325] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 716
[e4a47fb9ae614601b0925be682b4757c:28325] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 172
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_init failed
  --> Returned value Unable to start a daemon on the local node (-127) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems.  This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):

  ompi_mpi_init: ompi_rte_init failed
  --> Returned "Unable to start a daemon on the local node" (-127) instead of "Success" (0)
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
***    and potentially your MPI job)
[e4a47fb9ae614601b0925be682b4757c:28325] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!

    Start 58: MMS-upwinding3
7/7 Test #58: MMS-upwinding3 ...................***Failed    0.20 sec
[e4a47fb9ae614601b0925be682b4757c:28328] mca_base_component_repository_open: unable to open mca_pmix_ext3x: /usr/lib64/openmpi/lib/openmpi/mca_pmix_ext3x.so: undefined symbol: pmix_value_load (ignored)
[e4a47fb9ae614601b0925be682b4757c:28328] [[11146,0],0] ORTE_ERROR_LOG: Not found in file ess_hnp_module.c at line 320
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  opal_pmix_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
[e4a47fb9ae614601b0925be682b4757c:28327] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 716
[e4a47fb9ae614601b0925be682b4757c:28327] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon on the local node in file ess_singleton_module.c at line 172
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_init failed
  --> Returned value Unable to start a daemon on the local node (-127) instead of ORTE_SUCCESS
--------------------------------------------------------------------------
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems.  This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):

  ompi_mpi_init: ompi_rte_init failed
  --> Returned "Unable to start a daemon on the local node" (-127) instead of "Success" (0)
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
***    and potentially your MPI job)
[e4a47fb9ae614601b0925be682b4757c:28327] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!


0% tests passed, 7 tests failed out of 7

Total Test time (real) =   2.13 sec

The following tests FAILED:
	 52 - MMS-diffusion (Failed)
	 53 - MMS-wave-1d (Failed)
	 54 - MMS-wave-1d-y (Failed)
	 55 - MMS-bracket (Failed)
	 56 - MMS-derivatives3 (Failed)
	 57 - MMS-shiftedmetricinterp (Failed)
	 58 - MMS-upwinding3 (Failed)
Errors while running CTest
make[3]: *** [CMakeFiles/check-mms-tests.dir/build.make:73: CMakeFiles/check-mms-tests] Error 8
make[3]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[2]: *** [CMakeFiles/Makefile2:2795: CMakeFiles/check-mms-tests.dir/all] Error 2
make[2]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make[1]: *** [CMakeFiles/Makefile2:2830: CMakeFiles/check.dir/rule] Error 2
make[1]: Leaving directory '/builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/build_openmpi'
make: *** [Makefile:286: check] Error 2
++ exit 0
+ popd
~/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea
+ '[' openmpi = mpich ']'
+ . /etc/profile.d/modules.sh
++ '[' -n /bin/sh ']'
++ '[' sh = sh ']'
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ unset _mlshdbg
+++ '[' 0 = 1 ']'
+++ export 'MODULES_RUN_QUARANTINE=LD_LIBRARY_PATH LD_PRELOAD'
+++ MODULES_RUN_QUARANTINE='LD_LIBRARY_PATH LD_PRELOAD'
+++ unset _mlre _mlIFS
+++ '[' -n x ']'
+++ _mlIFS=' 	
'
+++ IFS=' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
+++ '[' LD_LIBRARY_PATH = LD_LIBRARY_PATH ']'
++++ eval 'echo ${LD_LIBRARY_PATH+x}'
+++++ echo x
+++ '[' -n x ']'
++++ eval 'echo ${LD_LIBRARY_PATH}'
+++++ echo /usr/lib64/openmpi/lib
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' '
+++ _mlrv=MODULES_RUNENV_LD_LIBRARY_PATH
++++ eval 'echo ${MODULES_RUNENV_LD_LIBRARY_PATH:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' '
+++ for _mlv in ${MODULES_RUN_QUARANTINE:-}
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
+++ '[' LD_PRELOAD = LD_PRELOAD ']'
++++ eval 'echo ${LD_PRELOAD+x}'
+++++ echo
+++ '[' -n '' ']'
+++ _mlrv=MODULES_RUNENV_LD_PRELOAD
++++ eval 'echo ${MODULES_RUNENV_LD_PRELOAD:-}'
+++++ echo
+++ _mlre='__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' '
+++ '[' -n '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' ' ']'
+++ _mlre='eval __MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\'' LD_LIBRARY_PATH='\'''\'' LD_PRELOAD='\'''\'' __MODULES_QUARANTINE_SET=1 '
++++ eval '__MODULES_QUAR_LD_LIBRARY_PATH='\''/usr/lib64/openmpi/lib'\''' 'LD_LIBRARY_PATH='\'''\''' 'LD_PRELOAD='\'''\''' __MODULES_QUARANTINE_SET=1 /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++++ __MODULES_QUAR_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
+++++ LD_LIBRARY_PATH=
+++++ LD_PRELOAD=
+++++ __MODULES_QUARANTINE_SET=1
+++++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh autoinit
+++ _mlcode='_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
+++ _mlret=0
+++ '[' -n x ']'
+++ IFS=' 	
'
+++ unset _mlIFS
+++ unset _mlre _mlv _mlrv
+++ '[' 0 -eq 0 ']'
+++ eval '_module_raw() {
   eval "$(/usr/bin/tclsh '\''/usr/share/Modules/libexec/modulecmd.tcl'\'' sh "$@")";
   _mlstatus=$?;
   return $_mlstatus;
};
module() {
   local _mlredir=0;
   if [ -n "${MODULES_REDIRECT_OUTPUT+x}" ]; then
      if [ "$MODULES_REDIRECT_OUTPUT" = '\''0'\'' ]; then
         _mlredir=0;
      elif [ "$MODULES_REDIRECT_OUTPUT" = '\''1'\'' ]; then
         _mlredir=1;
      fi;
   fi;
   case " $@ " in
      *'\'' --no-redirect '\''*) _mlredir=0 ;;
      *'\'' --redirect '\''*) _mlredir=1 ;;
   esac;
   if [ $_mlredir -eq 0 ]; then
      _module_raw "$@";
   else
      _module_raw "$@" 2>&1;
   fi;
};
ml() { module ml "$@"; };
MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl; export MODULES_CMD;
unset __MODULES_AUTOINIT_INPROGRESS;
MODULESHOME=/usr/share/Modules; export MODULESHOME;
test 0;'
++++ MODULES_CMD=/usr/share/Modules/libexec/modulecmd.tcl
++++ export MODULES_CMD
++++ unset __MODULES_AUTOINIT_INPROGRESS
++++ MODULESHOME=/usr/share/Modules
++++ export MODULESHOME
++++ test 0
+++ '[' /bin/sh '!=' '' ']'
+++ export -f _module_raw
+++ export -f module
++++ type -t ml
+++ '[' function = function ']'
+++ export -f ml
+++ unset _mlcode _mlret
+++ '[' -n '' ']'
+ module unload mpi/openmpi-x86_64
+ local _mlredir=0
+ '[' -n '' ']'
+ case " $@ " in
+ '[' 0 -eq 0 ']'
+ _module_raw unload mpi/openmpi-x86_64
++ /usr/bin/tclsh /usr/share/Modules/libexec/modulecmd.tcl sh unload mpi/openmpi-x86_64
+ eval 'unset MPI_COMPILER;
unset LD_LIBRARY_PATH;
MANPATH=/usr/share/man:; export MANPATH;
unset MPI_INCLUDE;
unset MPI_MAN;
unset _LMFILES_;
unset LOADEDMODULES;
PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig; export PKG_CONFIG_PATH;
unset MPI_PYTHON3_SITEARCH;
unset MPI_HOME;
unset MPI_FORTRAN_MOD_DIR;
unset __MODULES_LMALTNAME;
unset __MODULES_LMCONFLICT;
__MODULES_SHARE_MANPATH=:1; export __MODULES_SHARE_MANPATH;
unset MPI_SUFFIX;
unset MPI_SYSCONFIG;
__MODULES_SHARE_PKG_CONFIG_PATH=:1; export __MODULES_SHARE_PKG_CONFIG_PATH;
unset MPI_LIB;
PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin; export PATH;
unset MPI_BIN;
test 0;'
++ unset MPI_COMPILER
Processing files: bout++-mpich-5.0.0-10.fc40.x86_64
++ unset LD_LIBRARY_PATH
++ MANPATH=/usr/share/man:
++ export MANPATH
++ unset MPI_INCLUDE
++ unset MPI_MAN
++ unset _LMFILES_
++ unset LOADEDMODULES
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_HOME
++ unset MPI_FORTRAN_MOD_DIR
++ unset __MODULES_LMALTNAME
++ unset __MODULES_LMCONFLICT
++ __MODULES_SHARE_MANPATH=:1
++ export __MODULES_SHARE_MANPATH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __MODULES_SHARE_PKG_CONFIG_PATH=:1
++ export __MODULES_SHARE_PKG_CONFIG_PATH
++ unset MPI_LIB
++ PATH=/usr/share/Modules/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ unset MPI_BIN
++ test 0
+ _mlstatus=0
+ return 0
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.8S0V3Q
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.NXy09H
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-mpich
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-mpich
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-mpich = 5.0.0-10.fc40 bout++-mpich(x86-64) = 5.0.0-10.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.12()(64bit)(mpich-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.19()(64bit)(mpich-x86_64) libpvode.so.1.0.0()(64bit)(mpich-x86_64) libpvpre.so.1.0.0()(64bit)(mpich-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(mpich-x86_64) libsundials_cvode.so.6()(64bit)(mpich-x86_64) libsundials_ida.so.6()(64bit)(mpich-x86_64) libsundials_nvecparallel.so.6()(64bit)(mpich-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-mpich-devel-5.0.0-10.fc40.x86_64
Provides: bout++-mpich-devel = 5.0.0-10.fc40 bout++-mpich-devel(x86-64) = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-mpich-devel make mpark-variant-devel mpich-devel netcdf-cxx4-devel netcdf-devel petsc-mpich-devel sundials-devel sundials-mpich-devel zlib-devel
Processing files: python3-bout++-mpich-5.0.0-10.fc40.x86_64
Provides: libboutpp.cpython-312-x86_64-linux-gnu.so()(64bit)(mpich-x86_64) python-bout++-mpich = 5.0.0-10.fc40 python3-bout++-mpich = 5.0.0-10.fc40 python3-bout++-mpich(x86-64) = 5.0.0-10.fc40 python3.12-bout++-mpich = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.0.0()(64bit)(mpich-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-openmpi-5.0.0-10.fc40.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.5qM6RN
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.0h0qeZ
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/bout++-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bout++-openmpi = 5.0.0-10.fc40 bout++-openmpi(x86-64) = 5.0.0-10.fc40 bundled(libpvode) libbout++.so.5.0.0()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/python3 /usr/bin/sh libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfftw3.so.3()(64bit) libflexiblas.so.3()(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libnetcdf.so.19()(64bit) libnetcdf_c++4.so.1()(64bit) libpetsc.so.3.19()(64bit)(openmpi-x86_64) libpvode.so.1.0.0()(64bit)(openmpi-x86_64) libpvpre.so.1.0.0()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsundials_arkode.so.5()(64bit)(openmpi-x86_64) libsundials_cvode.so.6()(64bit)(openmpi-x86_64) libsundials_ida.so.6()(64bit)(openmpi-x86_64) libsundials_nvecparallel.so.6()(64bit)(openmpi-x86_64) rtld(GNU_HASH)
Recommends: environment-modules python3-boutdata python3-boututils python3-xbout
Processing files: bout++-openmpi-devel-5.0.0-10.fc40.x86_64
Provides: bout++-openmpi-devel = 5.0.0-10.fc40 bout++-openmpi-devel(x86-64) = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: fftw-devel flexiblas-devel gcc-c++ gettext-devel hdf5-devel hdf5-openmpi-devel make mpark-variant-devel netcdf-cxx4-devel netcdf-devel openmpi-devel petsc-openmpi-devel sundials-devel sundials-openmpi-devel zlib-devel
Processing files: python3-bout++-openmpi-5.0.0-10.fc40.x86_64
Provides: libboutpp.cpython-312-x86_64-linux-gnu.so()(64bit)(openmpi-x86_64) python-bout++-openmpi = 5.0.0-10.fc40 python3-bout++-openmpi = 5.0.0-10.fc40 python3-bout++-openmpi(x86-64) = 5.0.0-10.fc40 python3.12-bout++-openmpi = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: libbout++.so.5.0.0()(64bit)(openmpi-x86_64) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libfmt.so.10()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libmpi.so.40()(64bit)(openmpi-x86_64) libmpi_cxx.so.40()(64bit)(openmpi-x86_64) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH)
Recommends: python3-xbout
Processing files: bout++-common-5.0.0-10.fc40.x86_64
Provides: bout++-common = 5.0.0-10.fc40 bout++-common(x86-64) = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: python3-bout++-5.0.0-10.fc40.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.PRQHXH
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ DOCDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/README.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.bib /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CITATION.cff /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CHANGELOG.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/CONTRIBUTING.md /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/doc/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.YqBnaB
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ LICENSEDIR=/builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/python3-bout++
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/python3-bout++
+ cp -pr /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea/LICENSE.GPL /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64/usr/share/licenses/python3-bout++
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: python-bout++ = 5.0.0-10.fc40 python3-bout++ = 5.0.0-10.fc40 python3.12-bout++ = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: python3-boutdata python3-boututils python3-matplotlib python3-scipy
Processing files: bout++-doc-5.0.0-10.fc40.noarch
Provides: bout++-doc = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debugsource-5.0.0-10.fc40.x86_64
Provides: bout++-debugsource = 5.0.0-10.fc40 bout++-debugsource(x86-64) = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bout++-debuginfo-5.0.0-10.fc40.x86_64
Provides: bout++-debuginfo = 5.0.0-10.fc40 bout++-debuginfo(x86-64) = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-10.fc40
Processing files: bout++-mpich-debuginfo-5.0.0-10.fc40.x86_64
Provides: bout++-mpich-debuginfo = 5.0.0-10.fc40 bout++-mpich-debuginfo(x86-64) = 5.0.0-10.fc40 debuginfo(build-id) = 2cc0e7c517265a6d702bb8b8e67fb6bb0a326dce debuginfo(build-id) = 96a49f8dcea4fc87ef89705c4416485acdfbdc5c debuginfo(build-id) = cd7b6a93fbca467a977082f54ec13c64fa7c6f5c
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-10.fc40
Processing files: python3-bout++-mpich-debuginfo-5.0.0-10.fc40.x86_64
Provides: debuginfo(build-id) = 7e8182dc9a57a6c718302acf689a583ebf1f5a26 python-bout++-mpich-debuginfo = 5.0.0-10.fc40 python3-bout++-mpich-debuginfo = 5.0.0-10.fc40 python3-bout++-mpich-debuginfo(x86-64) = 5.0.0-10.fc40 python3.12-bout++-mpich-debuginfo = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-10.fc40
Processing files: bout++-openmpi-debuginfo-5.0.0-10.fc40.x86_64
Provides: bout++-openmpi-debuginfo = 5.0.0-10.fc40 bout++-openmpi-debuginfo(x86-64) = 5.0.0-10.fc40 debuginfo(build-id) = 738594a8fe9828052e4c1977d5203feae0b4bef1 debuginfo(build-id) = edbddcfa4f9331aa098bd8d7200ca2d7dd1499ef debuginfo(build-id) = f6c57efb76cf643e0f84539d94821d47cb87ac0e
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-10.fc40
Processing files: python3-bout++-openmpi-debuginfo-5.0.0-10.fc40.x86_64
Provides: debuginfo(build-id) = d25ce604dad955c7089a219f53d92846c043ae3d python-bout++-openmpi-debuginfo = 5.0.0-10.fc40 python3-bout++-openmpi-debuginfo = 5.0.0-10.fc40 python3-bout++-openmpi-debuginfo(x86-64) = 5.0.0-10.fc40 python3.12-bout++-openmpi-debuginfo = 5.0.0-10.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bout++-debugsource(x86-64) = 5.0.0-10.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
Wrote: /builddir/build/RPMS/bout++-openmpi-debuginfo-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-debuginfo-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debugsource-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-debuginfo-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-debuginfo-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-debuginfo-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-doc-5.0.0-10.fc40.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-openmpi-devel-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/bout++-mpich-devel-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-openmpi-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-5.0.0-10.fc40.noarch.rpm
Wrote: /builddir/build/RPMS/bout++-common-5.0.0-10.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/python3-bout++-mpich-5.0.0-10.fc40.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.SyY1j1
+ umask 022
+ cd /builddir/build/BUILD
+ cd BOUT++-v5.0.0.dev10626+gd935fa1ea
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/bout++-5.0.0-10.fc40.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.1ZgYF1
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/BOUT++-v5.0.0.dev10626+gd935fa1ea-SPECPARTS
+ rm -rf BOUT++-v5.0.0.dev10626+gd935fa1ea BOUT++-v5.0.0.dev10626+gd935fa1ea.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild bout++-5.0.0-10.fc40.src.rpm
Finish: build phase for bout++-5.0.0-10.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1695196992.761791/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/bout++-5.0.0-10.fc40.src.rpm) Config(child) 32 minutes 50 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "bout++-openmpi",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-debugsource",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-mpich",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-devel",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "python3-bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "src"
        },
        {
            "name": "python3-bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-common",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-doc",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "noarch"
        },
        {
            "name": "python3-bout++",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "noarch"
        },
        {
            "name": "python3-bout++-openmpi",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-mpich-debuginfo",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        },
        {
            "name": "bout++-openmpi-devel",
            "epoch": null,
            "version": "5.0.0",
            "release": "10.fc40",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished